Gene Namu_4242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_4242 
Symbol 
ID8449868 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp4717704 
End bp4718678 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content78% 
IMG OID645043291 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_003203520 
Protein GI258654364 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.365173 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGGTCC TGGTCACCGG GGCCACCAGC CTGGTCGGGC GGGTGACCGT CCGGCGCCTG 
GTGGACCGGG GCGACGAGGT CACCACCCTG CAGCGCGGGA CCACCGACCT GCCCGGACGC
GCGCTCCGCG GCTCGCTCAC CGACCCGGAT GCCGTGGAAC GGGCCTGCGC CGGGCAGGAC
GCCGTCATTC ACCTGGCCGC CCGGGTCGGC GCGGCCGGCC CGTGGTCCGA GTTCGAACGG
GTCAACGTCA CCGGCACCGC CAATCTGCTG GCCGCCGCCC GCCGGGCCGG GGCCGGGGCG
TTCGTGCACG TCTCGTCGCC GTCGGTGGCC CATGCCGGGC GCTCCCTGGT CGGCGCCGAG
GCCGATCCGG CGAACCCGGC GACCGCCCGC GGCGCCTACG CCCGGAGCAA GGCGCTGGGC
GAGCGGGCCG CCCTGGCGGC CTCGTCGCCG GCGATGCCGG TGGTGGTGCT GCGTCCGCAC
CTGATCTGGG GACCGGGCGA CACCCAGCTG GTCGGCCGGG TGGTGGACCG GGCCCGGCGC
GGCCGCCTGG CCCTCGTCGG CCCCGGCACC GCCCTGGTCG ACACCCTGTA CGTGGACAAC
GCCGCGGACG CGCTGGTGGC CGCGCTGGAT CAGGCCCCCC GGCTGGGTGG GCGGGTGTTC
GTCCTGTCCA ACGGGCAGCC GCGCACGGCG GCCGAACTGA CCGCCCGGGT GCTGGCCGCG
GCCGGCCTGA CCGTGACCCC CCGGCACGTC CCGAGGTGGC TGGCCGTCGC GGGCGGGTCG
CTGGTCGAGC AGGTCTGGGC GCGCACCGGC CGCACCGACG ATCCGCCGAT GACCCGGTTC
CTGGCCGAGC AGCTGGCCAC CGCGCACTGG TTCCGCCAGG CCCCCGCCCA GGCCGCCCTG
CACTGGCGGC CGGCGGTCGG CCTGGACGAG GGCTTCGCCC GGTTGGCCGA CTGGTTCCGG
TCCGGACGGG TCTGA
 
Protein sequence
MKVLVTGATS LVGRVTVRRL VDRGDEVTTL QRGTTDLPGR ALRGSLTDPD AVERACAGQD 
AVIHLAARVG AAGPWSEFER VNVTGTANLL AAARRAGAGA FVHVSSPSVA HAGRSLVGAE
ADPANPATAR GAYARSKALG ERAALAASSP AMPVVVLRPH LIWGPGDTQL VGRVVDRARR
GRLALVGPGT ALVDTLYVDN AADALVAALD QAPRLGGRVF VLSNGQPRTA AELTARVLAA
AGLTVTPRHV PRWLAVAGGS LVEQVWARTG RTDDPPMTRF LAEQLATAHW FRQAPAQAAL
HWRPAVGLDE GFARLADWFR SGRV