Gene Namu_4210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_4210 
Symbol 
ID8449836 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp4654245 
End bp4655153 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content73% 
IMG OID645043259 
ProductdTDP-4-dehydrorhamnose reductase 
Protein accessionYP_003203488 
Protein GI258654332 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1091] dTDP-4-dehydrorhamnose reductase 
TIGRFAM ID[TIGR01214] dTDP-4-dehydrorhamnose reductase 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.319077 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTCAT CGATCCCATC GCGGCTGCTG GTGACCGGGG CCCGCGGTCA GCTGGGCACC 
GAGGTCGTGG CCGCGGCCAC GGCCGCCGGC CTGACCTACG CGGCCCACGG CTCGCGGGAG
CTGGACATCA CCGATGTCGA CGCCGTGACG GCGACGGTCG CGGATTTCGG CCGGGCCGCG
GATGAGGCCG GTCAGTCCGC GGTCCTGATC AACGCCGCCG CCTATACGGC GGTCGATGCG
GCGGAGTCCG ATCGGGACGC CGCCTACGCG GTGAACGCGA CGGGACCGCA GAACCTGGCT
CGCGCCTGCG CAGCCTGCGG AGTGCGACTG ATCCACGTCT CGACCGACTA CGTATTCCCC
GGTGACGGCC GGCGCCCGTA TGAGATCGAC GACCCGACGG GGCCGCGCAG CGTCTACGGC
GCGTCCAAGC TCGCCGGCGA GCAGGCCGTG CTGGCGAGCC TGGCCGGTGC GCAGGTGGTG
CGCACGGCCT GGGTGTGGGG TACGACCGGC GCCAACTTCG TCAAGACGAT GGCCGCGCTG
GCCGCGAGCC GGCCCACCGT GGACGTGGTC GACGATCAGC GGGGCTCCCC CACGTACGCC
GCCGATCTGG CCGCCGGGCT GCTCGAGCTG GCCGGCTCGG ACGTGCCCGG TGGGGTGCTG
CACGCGACCA ACGCCGGGGA GACGACCTGG TACGAGTTCG CGCGGGCGAT CTTCGCCGAG
CTGGGGGAGG ACCCCGGGCG GGTGCACCCG ACGACGAGCG ACAAGTTTCT CCGTCCGGCT
CCCCGGCCGG CCTATTCGGT GCTCTCCGGT GCGGCTTGGG CGGCCGCCGG ACTTAACCCC
CTACGACCGT GGCGGGTCGC CCTTGCTGAT GCAATGGCGC GGTCGGCTGA CGCGTTTCGG
GCCCGGTGA
 
Protein sequence
MTSSIPSRLL VTGARGQLGT EVVAAATAAG LTYAAHGSRE LDITDVDAVT ATVADFGRAA 
DEAGQSAVLI NAAAYTAVDA AESDRDAAYA VNATGPQNLA RACAACGVRL IHVSTDYVFP
GDGRRPYEID DPTGPRSVYG ASKLAGEQAV LASLAGAQVV RTAWVWGTTG ANFVKTMAAL
AASRPTVDVV DDQRGSPTYA ADLAAGLLEL AGSDVPGGVL HATNAGETTW YEFARAIFAE
LGEDPGRVHP TTSDKFLRPA PRPAYSVLSG AAWAAAGLNP LRPWRVALAD AMARSADAFR
AR