Gene Namu_4188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_4188 
Symbol 
ID8449814 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp4625091 
End bp4625945 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content65% 
IMG OID645043237 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_003203466 
Protein GI258654310 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCATG TCGTCGTCAC CGGGGCAGGT GGCTATCTCG GCCCGCACGT CGTGTCTGCT 
GTCTTGGATC GCGGCCACGC CGTCACCGCC GTGGTCCGAC CGGGCTCCAC GATCCGTCTG
GACGATCGCG CCGAGGTGCT GGAGGCGGAT GTGCTGCGCG ACGGGATCGA TATCCCGTCG
CGGGGGTCCG CGGGCCCAGT CACAGTCGTT CACCTGGCGT GGAGGGATGG ATTCCACCAC
AACTCACCCG CGCACATGGC CGAATTGTCG GCGCACTACC AGTTGCTGAC CGAGCTTCCG
AACCGCGGCG TTGCCCGGAT CATCGCATTG GGCACGATGC ACGAGGTCGG ATACTGGGAA
GGGGCGATCG ACGCGGACAC GCCGACGCAG CCGCTCTCCC AGTACGGCGT GGCCAAGGAC
GCGCTGCGCC GATCGTTGGA GTTGGCCCTA CCCGACTCGG TCGGACTCGT CTGGGCGAGG
GCGTTCTACA TCTATGGTGA CGACCGGCGC AACCGGTCGA TCTTCGCCCG CCTGCTGCAG
GCGGTCGACG AGGGGCAAAC CTCGCTTCCC TTCACTTCGG GTAAGAACCG GTACGACTTC
ATCAGAGTCG AGGAGCTGGG TCGGCAGTTG GCGGCCCTGG TCGACGCCGA GGACGTGACC
GGGACGCTCA ACTGCTGCAC CGGTCGACCG GTGTCGCTGG CCGACAAGGT GATGGAGTTC
ATCCGGGAGA ACGATCTCCC GATCAGCCTA GATTATGGTG CGTTTCCCGA CAGACCGTAC
GACTCCCCCG GGATCTGGGG AGACGCATCA CGCATCCTCG ATGTCGTAGC CAGAGACAAG
GTCGCGACCA GCTGA
 
Protein sequence
MAHVVVTGAG GYLGPHVVSA VLDRGHAVTA VVRPGSTIRL DDRAEVLEAD VLRDGIDIPS 
RGSAGPVTVV HLAWRDGFHH NSPAHMAELS AHYQLLTELP NRGVARIIAL GTMHEVGYWE
GAIDADTPTQ PLSQYGVAKD ALRRSLELAL PDSVGLVWAR AFYIYGDDRR NRSIFARLLQ
AVDEGQTSLP FTSGKNRYDF IRVEELGRQL AALVDAEDVT GTLNCCTGRP VSLADKVMEF
IRENDLPISL DYGAFPDRPY DSPGIWGDAS RILDVVARDK VATS