Gene Namu_4156 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_4156 
Symbol 
ID8449782 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp4590992 
End bp4591915 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content77% 
IMG OID645043205 
Productmethionyl-tRNA formyltransferase 
Protein accessionYP_003203434 
Protein GI258654278 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0223] Methionyl-tRNA formyltransferase 
TIGRFAM ID[TIGR00460] methionyl-tRNA formyltransferase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.413206 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00887894 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
CTGCGCATCG TTTTCGCCGG CACCCCGGCC CCGGCCGTCC CGTCGCTGAC CGCCCTGCTG 
GATTCCCGGC ACGAGGTCGC CGCCGTCATC ACCCGGCCGC CGGCGCCCCG CGGTCGCGGC
CGCACGCTCC ACCCCTCGCC GATCGGCGCC CTCGCCGAGT CGGCCGGTGT GCCCGTGCTG
ACCCCGCGCA GCGCGCGCGA TCCCGAGTTC GCCGAGCAGC TCGCCGCGAT CGAGCCCGAG
GCGGCCGCCG TGGTGGCCTA CGGCAACCTG TTACCGCCGC CGATCCTGGC CATCCCCGCG
CACGGCTGGG TGAACCTGCA CTTCAGCCTG CTGCCCGCCT GGCGCGGGGC GTCGCCGGTG
CCCGCGGCGA TCCGTGCCGG CGACGACATC ACCGGCGCGA GCACCTTCCG GCTGGAGGCC
GGGATGGACA CCGGGCCGGT GTACGGGCTG ATCACCGAGC CGATCGGGGA CGGCGACACC
GCCGGGGACC TGCTGGACCG GCTGGCCACC GCGGGGGCCC GGCTGCTGGT GGCCACCCTG
GACGGCCTGG CCGACGGCAC CGTCGTGGCC CTGCCGCAGT CCGCCGACGG GGTCAGCTAC
GCGGGCAAGA TCACCGTCGC CGACGCCCGG CTGGACTGGT CGATGCCGGC CACCGCCGTG
CACCGCACCA TTCGCAGCCT GACCCCCGAC CCCGGTGCCT GGACCGACTC GCCCTGGGGG
CGGCTGGTCC TCGGCCCGGT CGCGCACACC GACCGCACCG ACCTGCCCCC GGGCCGGCTC
GAGGCCGGCA AGCGGGACGT GCTGGTCGGT ACCGGCACCA CCGCGGTCCG GCTGGGCCGG
CTGACCGCGC CCGGTCGCAA ACCGATGGAC GCCGCCGATT GGGCCCGCGG CGCCCGTCCC
GAACCCGGCA CCCTGCTGGG CTGA
 
Protein sequence
MRIVFAGTPA PAVPSLTALL DSRHEVAAVI TRPPAPRGRG RTLHPSPIGA LAESAGVPVL 
TPRSARDPEF AEQLAAIEPE AAAVVAYGNL LPPPILAIPA HGWVNLHFSL LPAWRGASPV
PAAIRAGDDI TGASTFRLEA GMDTGPVYGL ITEPIGDGDT AGDLLDRLAT AGARLLVATL
DGLADGTVVA LPQSADGVSY AGKITVADAR LDWSMPATAV HRTIRSLTPD PGAWTDSPWG
RLVLGPVAHT DRTDLPPGRL EAGKRDVLVG TGTTAVRLGR LTAPGRKPMD AADWARGARP
EPGTLLG