Gene Namu_4142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_4142 
Symbol 
ID8449768 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp4578628 
End bp4579035 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content68% 
IMG OID645043191 
Productribosomal protein L20 
Protein accessionYP_003203420 
Protein GI258654264 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0292] Ribosomal protein L20 
TIGRFAM ID[TIGR01032] ribosomal protein L20 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.000151582 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000263316 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCCAGAG TGAAGCGGGC AGTCAACGCC CAGAAGAAGC GCCGTGTCGT CCTTGAGCGC 
GCCAGCGGCT ACCGCGGCCA GCGGTCCCGC CTGTACCGCA AGGCCAAGGA ACAGACGCTG
CATTCGGCGA ATTACGCCTA CAACGACCGC CGCAAGCGCA AGAACGACTT CCGCAAGCTG
TGGATCACCC GCATCAACGC GGCTGCCCGT GCGCACGGCA TGACCTACAA CCGGTTCATG
CAGGGCCTCA AGATCGCCGA GGTCGACGTC GACCGCAAGG TGCTGGCCGA GCTGGCCGTC
AACGACATCG CCGCGTTCGC CGGCCTGGTC AAGGTCGCCC ACGACGCGCT GGAGTCCTCC
GGCGCTGCGG CCGCCGCTCA GGCCCCGACC GCTGCGGACG CAGCCTGA
 
Protein sequence
MSRVKRAVNA QKKRRVVLER ASGYRGQRSR LYRKAKEQTL HSANYAYNDR RKRKNDFRKL 
WITRINAAAR AHGMTYNRFM QGLKIAEVDV DRKVLAELAV NDIAAFAGLV KVAHDALESS
GAAAAAQAPT AADAA