| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_4121 |
|---|
| Symbol | |
|---|
| ID | 8449744 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | + |
|---|
| Start bp | 4548277 |
|---|
| End bp | 4551018 |
|---|
| Gene Length | 2742 bp |
|---|
| Protein Length | 913 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 645043167 |
|---|
| Product | ATPase, P-type (transporting), HAD superfamily, subfamily IC |
|---|
| Protein accession | YP_003203399 |
|---|
| Protein GI | 258654243 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0474] Cation transport ATPase |
|---|
| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.00147222 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCGA CTGCACCGGT CGGCCCGGCG CCGACCTCCA CCGTCCGCTG GTACGCCCTG
CCCGTGGCGG AGGTGTCGAC GCGCCTTCAG GTCGACCCGG CCGCCGGGTT GTCGGCCGCG
ACGGCCGCCC AACGCCTGGC CGAGCACGGC CCCAACGCCC TGCCCGCGGA GAACCCACCG
CCCGGCTGGC GGCGGTTCCT GGCCCAGTAC GCCGCGTACA TGCAGATCAT CCTGGTGATC
GCCGGGGTGC TCTCGCTGGT CATCGGTCAG TGGAGCACCG GCGGTGCCCT CCTGGCGCTG
ACCGTGTTCA ACGCCGCCGT CGGCATGCGG CAGGAGGGCA AGGCCGAGAG CGCGATGAAC
GCGCTCAAGT CGCTGACCAA GCGCACCGCC CGGGTCCGGC GGGACGGGGT GGAGGCCTCG
ATCGACGCGG AACAGGTGGT GGTCGGCGAC CTGGTCCTGC TCACCGCCGG TGACGACGTG
GCTGCGGACG GCCGGATCAT CCAGGCCTCG TCGCTGGACA TCGACGAGTC GGCGCTAACC
GGGGAGAGCA CGCCGGCGTC GAAGCTGCCG GATCCGCTGG GCACCGACGG CGCCGAGCTG
GGCCCCGGCG ACCAACGGAA CATGGCGTTC ATGAACACCC CGGTTACCCA CGGCAGCGGG
GTGATGCTGG TGACGGCGAT CGGCGCCGAC GCCCAGATCG GCAAGATCGC CGGGATGCTG
GCCGCGACGA AGAAGGAACA GACGCCGCTG GCCAAGCAGC TCAACGTGCT GACCCTGTGG
ATCGGGGCGG CCGCCCTGTT CACCATGATC GTGATGTTCG TGCTCGGCCT GCAACGGGGC
CAGTCCGCGG AGAGCCTGTT CATCACCGCC ATCGCGCTGG CCATCGCCGC CATCCCGACC
GCGCTGCCGA CGGTGCTCCA GGTCATCCTC TCGGCCGGGG CCAAGACGCT GGCCGGGGAG
CACGCGATCG TCAAGGAGCT GGGCTCTGTG GAGACCCTGG GCTCGACCTC GGCGATCAAT
TCCGACAAGA CCGGCACGCT GACGATGAAC CAGATGACGG TCGTCGAGGT GCTGGATCCG
CAGAACCGGT ACACGGTCTC CGGCATCGGT TACGGCCTGG AGGGAAAGAT CCACCACGCC
CTGGGCACCG AGTCCTCGAT CGAGGAGGCG ATCCTGCCGC TGCTGGTGGC CAGCGACGCG
ACCCTGGTCG GCGGCAAGGT GGTCGGCGAC CCGACCGAGG GTGCGATGCT CGTGCTGGGC
GCCAAGGCCG GCCTGGACAT CGACGCGACC CGCGAGGAGT TCCCGCGGCT GGCCACCCTG
CCGTTCGACC CGACCTACAA GCTGATGGCC ACCTTCAACA AGGCGGTCGA CGGCACCGGC
CGCGCGGTGG TCCGGTGCTT CGTCAAGGGC GCGGCCCCGG CCGTGATGTC GCGGACCGGC
AGCGGCTGGG TGCAGGGACA GCCGGTGGAG CTCACCGACG ACCTGAAGCA GCGGGCCCAG
GGCGCGATGG ACCGGATGGC CGGCGAGGGG CTGCGGGTGA TGGCCGGCGC CTTCCGCGAC
CTGGACCCGG CCTCGTTCGA TCCGGCCGGG GACCTGCTGA GCTACGTCAC CGATCTGCGC
ATGTGCTGCC TGATCGGCAT GGTCGACCCG CCCCGGGAGG CCTCCAAGCA GGCCGTCGCC
GACGCGCAGG CCGCGCACAT CCGGGTGCGG ATGATCACCG GCGACGACGT GAATACCGGC
GCCGCGATCG CCGCGAAGCT GGGCATCGAG GGCGAGGCGA TCCTGGGTTC GGAGCTGGCG
GCCATGAGCG AGGCCGAACG GCTGGCCCGG GTGGACTCGA TCGGCGTGGT CGGCCGCGTC
GCGCCCGAGC ACAAGGTGCT GCTGGTGCAG ACCCTGCGCC AGAAGGGAGA GGTCGTCGCG
ATGACCGGCG ACGGCGTCAA CGACGCGCCG GCCATCAAGG CGGCCGACAT CGGCATCGCC
ATGGGCTCGG GCACCCAGGT GTCCAAGAAC GCGTCCCGGA TGATCCTGTC CGACGACAAC
TTCGCCACCA TCATCAAGGC GGTCGAGCGC GGCCGGATGG TGTTCGACAA CCTGAACAAG
TTCGTCCGGT TCGTGATCAT CGAGCTGTGC GCCTACGTCA TCACGTTCCT GGGCGCGAGC
ATCCTGAACA TCGCGGCGGG CCAGCCGTTC ACCCCGTCGC AGATTCTCTA CATCAACTTC
CTGGTGAACG CGCCGCTGGG CGTCGCGCTG GGCATGGACA AGGAAGCGTC CGGGTTGATG
CTGCGGCGTC CCCGCCCCCG CAATGCCTCG ATCATGACAC CCGGTCTGCT GATCACCTCG
GGACTGGTCG GCCTGTACAT GGCGGTCACC ACGCTGCTCC TGATCTCCTA CGGCACCGAC
CAGCGAGGCG GCCTGCCCAT CGGCTCGTCG ATGGGCGTGA CCGCGTTCTC GCTGATGATC
GTGGTAGCGG CGTTCCAGGC GCGCAGCGTG ACCGCCAGCG CGTTGCGGAT GGAAACCTTC
GACAATCCGA AGCTGAACTG GACGGCCGTG GTCGAGGTCG TGCTGGCCGT GCTGATCACC
CAGCTCGAGC TGATGCGGCG GATCTTCGAC ACCGCCCAGA TCGGCATGAG CGAGTGGGCC
CTGTCCCTGG CTCCGGCGAT CGCGCTGTTC TTCGTCTGGG AGGTCGGCAA GCTCATCGCC
CGGCAGCGCT CGCCCCATCC AGCCGGGCAT CACGACGGTT GA
|
|---|
| Protein sequence | MTATAPVGPA PTSTVRWYAL PVAEVSTRLQ VDPAAGLSAA TAAQRLAEHG PNALPAENPP
PGWRRFLAQY AAYMQIILVI AGVLSLVIGQ WSTGGALLAL TVFNAAVGMR QEGKAESAMN
ALKSLTKRTA RVRRDGVEAS IDAEQVVVGD LVLLTAGDDV AADGRIIQAS SLDIDESALT
GESTPASKLP DPLGTDGAEL GPGDQRNMAF MNTPVTHGSG VMLVTAIGAD AQIGKIAGML
AATKKEQTPL AKQLNVLTLW IGAAALFTMI VMFVLGLQRG QSAESLFITA IALAIAAIPT
ALPTVLQVIL SAGAKTLAGE HAIVKELGSV ETLGSTSAIN SDKTGTLTMN QMTVVEVLDP
QNRYTVSGIG YGLEGKIHHA LGTESSIEEA ILPLLVASDA TLVGGKVVGD PTEGAMLVLG
AKAGLDIDAT REEFPRLATL PFDPTYKLMA TFNKAVDGTG RAVVRCFVKG AAPAVMSRTG
SGWVQGQPVE LTDDLKQRAQ GAMDRMAGEG LRVMAGAFRD LDPASFDPAG DLLSYVTDLR
MCCLIGMVDP PREASKQAVA DAQAAHIRVR MITGDDVNTG AAIAAKLGIE GEAILGSELA
AMSEAERLAR VDSIGVVGRV APEHKVLLVQ TLRQKGEVVA MTGDGVNDAP AIKAADIGIA
MGSGTQVSKN ASRMILSDDN FATIIKAVER GRMVFDNLNK FVRFVIIELC AYVITFLGAS
ILNIAAGQPF TPSQILYINF LVNAPLGVAL GMDKEASGLM LRRPRPRNAS IMTPGLLITS
GLVGLYMAVT TLLLISYGTD QRGGLPIGSS MGVTAFSLMI VVAAFQARSV TASALRMETF
DNPKLNWTAV VEVVLAVLIT QLELMRRIFD TAQIGMSEWA LSLAPAIALF FVWEVGKLIA
RQRSPHPAGH HDG
|
|---|
| |