| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_4120 |
|---|
| Symbol | |
|---|
| ID | 8449743 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | + |
|---|
| Start bp | 4547414 |
|---|
| End bp | 4548247 |
|---|
| Gene Length | 834 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 645043166 |
|---|
| Product | protein of unknown function DUF344 |
|---|
| Protein accession | YP_003203398 |
|---|
| Protein GI | 258654242 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2326] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 0.794478 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.00182923 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAGCA CATCCGGGAC CGGCAAGGGC GGCGACGCGA AGCGGGCCGG GCACCCGGTC
CCGAAGATGA AGACCAAGCC GTACGAGAAG CAGATGCGGC ACCTGCACGG TGAGCTCGTG
GCCATGCAGG AGTGGGTGAA ATCCTCCGGG GCCAAGATCA TCGTCGTGTT CGAGGGCCGG
GACACGGCCG GCAAGGGCGG CACGATCAAA CGCATCACCG AACGGGTCAG TCCCCGGGTG
TTCCGGGTGG TGGCGCTACC CGCCCCGACC GACCGGCAGA AGTCGCAGAT GTACCTGCAG
CGCTACGTCG AGCACTTCCC CGCCGCCGGC GAGGTCATCA TCTTCGACCG CAGTTGGTAC
AACCGGGCCG GCGTCGAGCG GGTAATGGGC TTCACCCCGA TGGCTCAGGT CGAACGGTTC
CTCGAGCAGA CGCCGTCCTT CGAGAAGGCG ATGGTCGAAT CGGGCATCCA GCTGATCAAG
TACTGGCTGG AGGTGGGACC GGAGGAACAG ACCCGCCGGT TGGAGGGGCG GATCAACGAT
CCGCGCAAGA TCTGGAAGCT CTCGGACATG GACCTGAAGT CCTACCAGCG CTGGTTCGAC
TACTCGCGGG CCCGTGACGA CATGTTCCGG GAGACCGACA CCTCCTGGGC GCCCTGGTAC
ATCGCCGACA CCAACGACAA GAAACGCGGC CGGCTCAACA TCATCACCCA CCTGCTGAGC
CTGGTGCCCT ACGAGCCGCT GCACATGCCG AAGACCAAGC TGCCCAAGCG GCACCCGGAC
CCCACGTACG TCGAACCGCA CCTTCCGCTG CGGTACGTCC CGACGACGTT CTGA
|
|---|
| Protein sequence | MASTSGTGKG GDAKRAGHPV PKMKTKPYEK QMRHLHGELV AMQEWVKSSG AKIIVVFEGR
DTAGKGGTIK RITERVSPRV FRVVALPAPT DRQKSQMYLQ RYVEHFPAAG EVIIFDRSWY
NRAGVERVMG FTPMAQVERF LEQTPSFEKA MVESGIQLIK YWLEVGPEEQ TRRLEGRIND
PRKIWKLSDM DLKSYQRWFD YSRARDDMFR ETDTSWAPWY IADTNDKKRG RLNIITHLLS
LVPYEPLHMP KTKLPKRHPD PTYVEPHLPL RYVPTTF
|
|---|
| |