| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_4115 |
|---|
| Symbol | |
|---|
| ID | 8449738 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | + |
|---|
| Start bp | 4541817 |
|---|
| End bp | 4542227 |
|---|
| Gene Length | 411 bp |
|---|
| Protein Length | 136 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 645043161 |
|---|
| Product | anti-sigma-factor antagonist |
|---|
| Protein accession | YP_003203393 |
|---|
| Protein GI | 258654237 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
|---|
| TIGRFAM ID | [TIGR00377] anti-anti-sigma factor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.0231593 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.0203819 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGAAC CCCATCGACA GCCGGCGAGT GCCGCCGCCC GATCCCCGGG CTCGCCGACG
GTCACCATCA TGGTGGCCGG ACGCGCCGGT GCGGGAACGC TCGTGCGCAT CGTCGGTCGG
CTGGACGCGC GGGAGGCCCC CCGGGTCGCC CGCGAACTGG CCGCGGTGAA CCGGCTCCCC
CGCCGCGGAC CGCCGCGGCT CACCCTCGAC CTGTCCGGGG TCAGCTACCT GGACGACACC
GGTCTGGAGG TCCTGCTGCA ACTGCAGGAC CGGCTCGCCG CCCAGGGCGG TGAGCTGGAG
TTGCAGTCGC CGACCGCCGC CGTGGTCCGG CTGCTGCACG AAGCCCACCT GCACGGGGCG
GCCGGACTGC GGGCGCCGGC CCGTGAGCTG CGGCCACCGA CCGGGCCGTG A
|
|---|
| Protein sequence | MAEPHRQPAS AAARSPGSPT VTIMVAGRAG AGTLVRIVGR LDAREAPRVA RELAAVNRLP
RRGPPRLTLD LSGVSYLDDT GLEVLLQLQD RLAAQGGELE LQSPTAAVVR LLHEAHLHGA
AGLRAPAREL RPPTGP
|
|---|
| |