Gene Namu_4092 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_4092 
Symbol 
ID8449715 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp4518472 
End bp4520220 
Gene Length1749 bp 
Protein Length582 aa 
Translation table11 
GC content72% 
IMG OID645043139 
Producthypothetical protein 
Protein accessionYP_003203371 
Protein GI258654215 
COG category[C] Energy production and conversion 
COG ID[COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0167446 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACACGG GTACGACGAG CAACCGGACG GTGGAGTGCG ACCTGCTGGT CGCCGGAGGG 
GGTGCGGGTG GCCTGTCCGC CGCGGTGACC GCCGCGCACC AGGGCCTGGA CGTGATCGTC
GTGGACAAGG CCTCCACCCT GGGCGGGGCG ACCGCCTGGT CGGGCGGCTG GATGTGGGCG
CCGCTCAATC CGCTGTCCCG GGCCGACGGC ATCGTCGAGG ACGTCGACGA GCCGCGCACC
TACCTCAAGC ACGCGCTGGG GGAGAACTAC GACGAGCCGC GGGTCGAGGC CCTGCTGGCC
AACGCCCCGA AGATGGTCGA CTTCTTCGAG AACCAGACCA GCCTGCAGTT CGTCAGCGGC
ACCTGGATCG CCGACATCCT GGGCGACCTG CCCGGCGCCG GCACCGGCGG CCGCTCGGTC
GGGCCCAAGC CGATCAACGC CCGCAAGCTG CGCAAGGACC TGCGGGCGCT GGTCCGCCCC
CAGCTGTACG AGACCTCGTT CCTGGGCATG GGCATCATGG CCGGCCCGGA CCTGCAGGCG
TTCCTGCACG CCACGGCCGA CGTCAAGTCC TTCTTCCACG CCGCCTGGCG GGTCGCCTTC
CATGTCTGGG ATCTGCTCAC CCAGCGGCGC GGCATGCAGC TGGTGAACGG CCCGGCCCTG
ATCGCGCGGC TGATCAAGTC CGCCGACGAG GCCGGCGTGC GGATGTGGGT CGACTCACCG
GTGATGCAGC TGCTGACCGA CACCAGCACC GACAACGAAA ACGACATCGA CACCGACGGG
CGGGTCACCG GCGCGTTGGT GCAGCACCCG TCCGGCCCGG TGACCATCCG CGCGCGGCGC
GGGGTGGTGC TGGCCACCGG CGGCTTCCCC CGCGACGTCT ACCGGCGGGC CGAGTTCTAC
CCGCGCACCC CGACCGGCCG TGAGCACTGG ACCCTGGCCC CGGCCGAGAC CACCGGCGAC
GGGATCACCG TGGCCGAACG GGTGGGCGCC GCGTTGGACA CCTCGCTGGC CTCTCCGGCG
GCCTGGTGCC CGGTCTCGCT GGTCCCGTAC CGCAACGGGC GGGTGGGCAC CTACCCGCAC
ATCGTCGACC GGGGCAAGCC CGGCCTGATC GCGGTGACGG CCACCGGCCG CCGGTTCGTC
AACGAGGCCG ACGGCTACTA CCAGTTCACG ACGGCGATGA TCGATGCCGC CCCCGAGGGT
GAGCCGGTGC AGGCCTGGCT GATCTGCGAC CACGCGTTCC AGCGGCGGTA CCCGTTCGGC
ATGGCCAAGC CGTTCCCGGT GCCCACCTTC CCGTACCTGC GGAACGGTTA CATGAAGCGC
GGCAAGACCC TGGGCGAGCT GGCCGTCAAG TGCGGGATCG ACCCGGCCGG CCTGGAGCGG
ACGGTGGCCG AGTTCAACAC CCACGCCCGG CTCGGGCAGG ACCCCGAGTT CGGCCGCGGG
CGCACCGTCT TCAATCGCGG CTCCGGCGAC AAGGACCACG GCCCCAACCC GTCGTTGGCC
CCGCTGGAGC AGGGTCCGTT CTACGCGATC CGGGTGCTGC CCGGCAGTTT CGGCACGTTC
TACGGCCTGC GCGCGGACGC CGACGCTCGG GTGCTGCGGG CCGACGGGTC GGTGATCCCG
GGCCTGTACG CGGCCGGCAG CGATCAGGCG AACGTGATGG GCGGGCATTA CCCGTCGGGC
GGCATCAACA TCGGCCCGGC CATGACGTTC GGCTACATCG CCGGCCGGCA CGCCGCCGGC
GACCGCTAG
 
Protein sequence
MDTGTTSNRT VECDLLVAGG GAGGLSAAVT AAHQGLDVIV VDKASTLGGA TAWSGGWMWA 
PLNPLSRADG IVEDVDEPRT YLKHALGENY DEPRVEALLA NAPKMVDFFE NQTSLQFVSG
TWIADILGDL PGAGTGGRSV GPKPINARKL RKDLRALVRP QLYETSFLGM GIMAGPDLQA
FLHATADVKS FFHAAWRVAF HVWDLLTQRR GMQLVNGPAL IARLIKSADE AGVRMWVDSP
VMQLLTDTST DNENDIDTDG RVTGALVQHP SGPVTIRARR GVVLATGGFP RDVYRRAEFY
PRTPTGREHW TLAPAETTGD GITVAERVGA ALDTSLASPA AWCPVSLVPY RNGRVGTYPH
IVDRGKPGLI AVTATGRRFV NEADGYYQFT TAMIDAAPEG EPVQAWLICD HAFQRRYPFG
MAKPFPVPTF PYLRNGYMKR GKTLGELAVK CGIDPAGLER TVAEFNTHAR LGQDPEFGRG
RTVFNRGSGD KDHGPNPSLA PLEQGPFYAI RVLPGSFGTF YGLRADADAR VLRADGSVIP
GLYAAGSDQA NVMGGHYPSG GINIGPAMTF GYIAGRHAAG DR