| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_4089 |
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| Symbol | |
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| ID | 8449712 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | - |
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| Start bp | 4514202 |
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| End bp | 4515929 |
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| Gene Length | 1728 bp |
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| Protein Length | 575 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 645043136 |
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| Product | Poly-beta-hydroxybutyrate polymerase domain protein |
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| Protein accession | YP_003203368 |
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| Protein GI | 258654212 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG3243] Poly(3-hydroxyalkanoate) synthetase |
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| TIGRFAM ID | [TIGR01838] poly(R)-hydroxyalkanoic acid synthase, class I |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00270909 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCACCGG AACTTCCAGA GGCACTGCGG GACGTCGCCG AGCGGGCGGC CAGCGTGCTC
GCGCCTGAGA CGGACATCTT CGAGGACGTC GACGTCGCCG GGTTCGGCGA GTCGTTGGCC
AAGGCCCTGC GCACCTCGGT CACCCAGCCG ACCGTGCCCA TCAAGTCCGC CTTCCATCTG
GCCGGTGACC TGGTCCGGAT CCCGGTCGCG GCGGGCGCCC GCTGGCTGGG CCGGGACGTC
ACCCCGCCGG TGGACGCCGA TCCCAAGGAC CGCCGGTTCG CCGCCGCGGC CTGGCAGGAC
AACCCGGCCT ACTACTCGAT CCGGATGGCC TACCTGGCCT CGGCCAAGGC GGCTCGCGAG
CTGGTCGGCT CGGCCAATCT GAGCCCGGAC GAGAGCCGCA AGGCGATGAT GGCGCTGGAT
CTGATCGTCG ACGCGCTGGC CCCGACCAAC TTCCTGCCGA CCAACCCGGC CGCCCTGCAG
AAGGCGTTCG ACACCGCCGG GGCCAGCCTG CTCAAGGGCG CCCGCAACTT CGTCGGCGAC
GTCATCAACA ACGGCGGCAA GCCGCAGCAG GTGGACCGCA GCGGCTTCGA GGTCGGCGTC
AACCTGGCCT GCACCCCGGC CAAGGTGGTG TACCAGAACG AGCTGATGGA GCTGCTGCAG
TACGAGCCGC AGACCGAGCA GGTGCACGCC ACCCCGCTGC TGTGCAGCCC GCCCTGGATC
AACAAGTACT ACATCATGGA TCTCGCGCCG AACCGCAGCT TCATCGAATG GGCGGTCACG
CACGGGCGCA CGGTCTTCGC CATCAGCTAC AAGAACCCGT CGGCCGACAT GGCCGGCACC
ACCATGGACG ACTACCTGGT GCACGGGCCG CAGACCGCGC TGGACGTGAT CGAGGAGATC
ACCGGGGCGC AGACCATCGA CATCGTCGGG CTGTGCCTGG GCGGGGCGAT GACCGCCATC
ACCGCCGCAT TCCTGACCCA GCAGGGTGAC AACCGGGTCG GCACGCTGAC CCTGCTCAAC
ACCATGCTCG ACTACGACCA GCCCGGCCAG CTCGGCGCGT TCACCGACCT GAAGTCGGTG
GAGCGGCTGG AGAAGAAGAT GAAGAAGGCG GGCACGCTCG AAGGCGAGAC GATGGCCGGC
ACCTTCGACA TCCTGCGGGC CAACGACCTG ATCTTCAACT ACGTGGTCTC CAACTGGCTG
ATGGGTCAGC CGCCGCCCGC CTTCGACATC CTGGCCTGGA ACGCCGACAG CACCCGGATG
CCCGCGGCGA TGCACGCGTT CTACCTCAAG AACTTCTACG TGCAGAACAA GTTGGCCGCC
GGCACGCTCG AGATCGGTGG CGCCACCATC GATCTGAGCG TGATCAAGTC GCCGGTCTAC
GTGGTCAGCG CGATCAACGA CCACATCGTG CTGTGGGAAT CGGCCTACAA GACCGTCAAT
CTGGTCAGCG GACCGGTGCG GTTCGTGCTG GGCAGCGGCG GGCACATCGC CGGCATCGTC
AGCCCGCCCG GACCCAAGGT CTGGTACCAG GTCGCCGAGG GCGACGAGCA GCTGCCGGCG
ACCGGCGCCG AGTGGCGGAC CACGGCGGCG CGCAAGCAGG GCACCTGGTG GGACGACTGG
GCCCGTTGGT CCGACGAGAC CTCCGGGCCG ATGATCGACC CGCCGTCGAT GGGCAGCGCG
AAGTACCCGG TGCTTCGCTC GGGCCCGGGC AGCTACGTCA AGGGCTGA
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| Protein sequence | MAPELPEALR DVAERAASVL APETDIFEDV DVAGFGESLA KALRTSVTQP TVPIKSAFHL
AGDLVRIPVA AGARWLGRDV TPPVDADPKD RRFAAAAWQD NPAYYSIRMA YLASAKAARE
LVGSANLSPD ESRKAMMALD LIVDALAPTN FLPTNPAALQ KAFDTAGASL LKGARNFVGD
VINNGGKPQQ VDRSGFEVGV NLACTPAKVV YQNELMELLQ YEPQTEQVHA TPLLCSPPWI
NKYYIMDLAP NRSFIEWAVT HGRTVFAISY KNPSADMAGT TMDDYLVHGP QTALDVIEEI
TGAQTIDIVG LCLGGAMTAI TAAFLTQQGD NRVGTLTLLN TMLDYDQPGQ LGAFTDLKSV
ERLEKKMKKA GTLEGETMAG TFDILRANDL IFNYVVSNWL MGQPPPAFDI LAWNADSTRM
PAAMHAFYLK NFYVQNKLAA GTLEIGGATI DLSVIKSPVY VVSAINDHIV LWESAYKTVN
LVSGPVRFVL GSGGHIAGIV SPPGPKVWYQ VAEGDEQLPA TGAEWRTTAA RKQGTWWDDW
ARWSDETSGP MIDPPSMGSA KYPVLRSGPG SYVKG
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