Gene Namu_4083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_4083 
Symbol 
ID8449706 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp4507065 
End bp4507859 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content72% 
IMG OID645043130 
Producttranscriptional regulator, IclR family 
Protein accessionYP_003203362 
Protein GI258654206 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000457887 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCGTACCG GTGAGCGGAA CACTCATGAC TCGGTGATCG GGCGGGCCTC GGCGTTGCTG 
GGGGCCTACG ACTCCCGGCA CCTGGCCATC GGCGTGTCCG AACTGGCCCG CCGGTCGGGC
CTGGCCAAGA CCACCACCGC CCGGTTGGCC GCCGAACTGG CCGAGCACGG CTTCCTGGAG
CGCACCGAGG GCAGCGACTA CAAGCTGGGC AGCCGGATCT TCGAGCTGGG CTCGCTGGCC
TCCCGGCAGC GACAGCTGCG CGAGGTGGCG TTGCCGTACA TGGCCGATCT GCGCCAGGTC
AGCAAGCAGA CGGTGCACCT GGCCGTGCTG GTGGGCACCG AGGTGATGTA CGTGGAGATC
GTGCGCAGCC GGGACGCACC GCGGATGCCC TCCGAGGTGG GCGGCCGGTT GCCCGCCCAC
GCCTCCGGCG TCGGCAAGGC CATGCTGGCG TTCTCGCCGG AGCCGGTCGT CCAGTCGGTG
CTGGACACCG GCCTGCCGGC GGTCGGGCCG CGGACGATCA CCGCCCCCGG GCTGCTGCTG
CGGGAGCTGC GCCGGATCCG AGAGTTGGGA ATTGCCTACG AGAGTGAAGA GTCCGGGCAC
GGCATCGGTT GCGCAGCCAG CCCGATCATC GGCCCGGACG GGCAGGTCGT TGCGGCCATG
TCCATCTCGG GCTGGAACGG CAAGTTGGAC CTGCGCCGGA TCGGTCCGGC GGTCAAGACG
GCGGCCCTGG CACTGAGCCG CGACCTGGCC ATCCGTGGTC CGGCGGCCCG CCCCGCCTGG
GCCGGCCGGG TCTGA
 
Protein sequence
MRTGERNTHD SVIGRASALL GAYDSRHLAI GVSELARRSG LAKTTTARLA AELAEHGFLE 
RTEGSDYKLG SRIFELGSLA SRQRQLREVA LPYMADLRQV SKQTVHLAVL VGTEVMYVEI
VRSRDAPRMP SEVGGRLPAH ASGVGKAMLA FSPEPVVQSV LDTGLPAVGP RTITAPGLLL
RELRRIRELG IAYESEESGH GIGCAASPII GPDGQVVAAM SISGWNGKLD LRRIGPAVKT
AALALSRDLA IRGPAARPAW AGRV