Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_4083 |
Symbol | |
ID | 8449706 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | + |
Start bp | 4507065 |
End bp | 4507859 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 645043130 |
Product | transcriptional regulator, IclR family |
Protein accession | YP_003203362 |
Protein GI | 258654206 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0000457887 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCGTACCG GTGAGCGGAA CACTCATGAC TCGGTGATCG GGCGGGCCTC GGCGTTGCTG GGGGCCTACG ACTCCCGGCA CCTGGCCATC GGCGTGTCCG AACTGGCCCG CCGGTCGGGC CTGGCCAAGA CCACCACCGC CCGGTTGGCC GCCGAACTGG CCGAGCACGG CTTCCTGGAG CGCACCGAGG GCAGCGACTA CAAGCTGGGC AGCCGGATCT TCGAGCTGGG CTCGCTGGCC TCCCGGCAGC GACAGCTGCG CGAGGTGGCG TTGCCGTACA TGGCCGATCT GCGCCAGGTC AGCAAGCAGA CGGTGCACCT GGCCGTGCTG GTGGGCACCG AGGTGATGTA CGTGGAGATC GTGCGCAGCC GGGACGCACC GCGGATGCCC TCCGAGGTGG GCGGCCGGTT GCCCGCCCAC GCCTCCGGCG TCGGCAAGGC CATGCTGGCG TTCTCGCCGG AGCCGGTCGT CCAGTCGGTG CTGGACACCG GCCTGCCGGC GGTCGGGCCG CGGACGATCA CCGCCCCCGG GCTGCTGCTG CGGGAGCTGC GCCGGATCCG AGAGTTGGGA ATTGCCTACG AGAGTGAAGA GTCCGGGCAC GGCATCGGTT GCGCAGCCAG CCCGATCATC GGCCCGGACG GGCAGGTCGT TGCGGCCATG TCCATCTCGG GCTGGAACGG CAAGTTGGAC CTGCGCCGGA TCGGTCCGGC GGTCAAGACG GCGGCCCTGG CACTGAGCCG CGACCTGGCC ATCCGTGGTC CGGCGGCCCG CCCCGCCTGG GCCGGCCGGG TCTGA
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Protein sequence | MRTGERNTHD SVIGRASALL GAYDSRHLAI GVSELARRSG LAKTTTARLA AELAEHGFLE RTEGSDYKLG SRIFELGSLA SRQRQLREVA LPYMADLRQV SKQTVHLAVL VGTEVMYVEI VRSRDAPRMP SEVGGRLPAH ASGVGKAMLA FSPEPVVQSV LDTGLPAVGP RTITAPGLLL RELRRIRELG IAYESEESGH GIGCAASPII GPDGQVVAAM SISGWNGKLD LRRIGPAVKT AALALSRDLA IRGPAARPAW AGRV
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