| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_4082 |
|---|
| Symbol | |
|---|
| ID | 8449705 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | - |
|---|
| Start bp | 4505949 |
|---|
| End bp | 4506896 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 645043129 |
|---|
| Product | acetaldehyde dehydrogenase |
|---|
| Protein accession | YP_003203361 |
|---|
| Protein GI | 258654205 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG4569] Acetaldehyde dehydrogenase (acetylating) |
|---|
| TIGRFAM ID | [TIGR03215] acetaldehyde dehydrogenase (acetylating) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0000504143 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGACCAGCA CGACCGCCAC TGCGGCGCCC ACCACCACCG GTGGCCGGGC CACCGCCGCC
ATCGTCGGAC CCGGCAACAT CGGCACCGAT CTGCTCGTCA AGCTGCTGCG CTCCGAGCAC
ATCGACGTCA AGTACATGAT CGGGGTCGAC CCGGCCTCCG ACGGTCTGGC CCGGGCCCGC
TCGCTCGGCG TGCAGGCCAG TGCCGGTGGG GTGGACTGGT TGCTCGAGCA GGAGGTCCCG
GACCTGGTCT TCGAAGCGAC CTCGGCCAAG GCGCACCTGG CCAACGCCGA CCGTTACGCC
GCCGCCGGCA TCACGGCCAT CGACCTGACC CCGGCGGCCA TCGGCCCGTT CGTCTGCCCC
GCGGTCAACG CGGACGTGCA CGCTGGGGCG GCCAACGTCA ACATGATCAC CTGTGGCGGG
CAGGCCACCA TCCCGATGGT GCATGCCGTC TCCCGGGTGA CCCCGGTGCC GTACGCGGAG
ATCGTCGCCT CGATCGCCTC CCGGTCGGCC GGTCCGGGTA CCCGGGCCAA CATCGACGAG
TTCACCGAGA CCACCTCGCA TGCCATCGAA GCGGTGGGCG GAGCGGCCAA GGGCAAGGCG
ATCATCATCC TGAACCCGGT GACGCCGCCG ATGATCATGC GGGACACCGT GTTCTGCGCG
ATTGGCGCGG ACGCCGACCA GGATGCGATC AGCGAGTCGA TCCACCGGAT GGTGGCGACG
GTGCAGCAGT ACGTGCCCGG CTACACCTTG CGCAGCGATC CGCAGTTCGA CGACCCCAAC
CCGTTGTGGC ACGGCAACGG CCGGGTGGGC ATCTTCCTGG AAGTCCGCGG AAATGGCGAC
TACCTGCCCG AGTGGGCGGG AAATCTGGAC ATCATGACGG CCGCCGCGGT GCGTGCCGGA
GAAGTGATCG CTCTGTCGGG AACGATTCAG AAGGCGGCTA ACAAATGA
|
|---|
| Protein sequence | MTSTTATAAP TTTGGRATAA IVGPGNIGTD LLVKLLRSEH IDVKYMIGVD PASDGLARAR
SLGVQASAGG VDWLLEQEVP DLVFEATSAK AHLANADRYA AAGITAIDLT PAAIGPFVCP
AVNADVHAGA ANVNMITCGG QATIPMVHAV SRVTPVPYAE IVASIASRSA GPGTRANIDE
FTETTSHAIE AVGGAAKGKA IIILNPVTPP MIMRDTVFCA IGADADQDAI SESIHRMVAT
VQQYVPGYTL RSDPQFDDPN PLWHGNGRVG IFLEVRGNGD YLPEWAGNLD IMTAAAVRAG
EVIALSGTIQ KAANK
|
|---|
| |