| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_4062 |
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| Symbol | |
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| ID | 8449682 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | - |
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| Start bp | 4475937 |
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| End bp | 4476998 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 645043106 |
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| Product | tyrosine recombinase XerD |
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| Protein accession | YP_003203341 |
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| Protein GI | 258654185 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02225] tyrosine recombinase XerD |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.159612 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.47475 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCGGTGA ACCCGGCTCG GGAGGCGGTG GCCTCGCCGG TCGAGCCGTC GCCCGAGCTG
GTCGCCGCCC TGCGCGGGTA CCTCGATCAT CTGGTGGTCG AGCGCGGGGT GGCCCGCAAC
ACGGTGCTGT CCTACCGCCG TGACCTGAAC CGGTACCTGC AGTTCCTGGC CGCGGCCGGG
CGCACCCGGG TCGCGGACGT GACCGCCGCG GACGTCTCGG ACTTCCTGGT CTGCCTGCGC
ACCGGGGCCG ACGGCCGGCC GCCGCTGGCC GCCTCGTCCG CGGCCCGGGC GGTGGTCGCG
GCCCGCGGCT GGCACCGGTT CCTGCTCAAC GAGGGCACCG CCGAGGCCGA TCCGTCGCGG
GACGTGCACC CGCCGACGCC GGCCCGCCGG CTGCCCAAGG CGCTGCCGGT CGAGGCCATC
GGCCGGCTGC TGGACGCGGC CGGCTCCGCC GACCCGGACG GTCCTCGCGG CCTGCGTGAC
CGGGCCCTGC TCGAGCTGCT GTACGCGACC GGGGCCCGGA TCAGCGAGGT GGTCGGGCTC
GACGTCGACG ACATCGACCT CGGCCCGGGC CGCCTGGCCG GCCGGTCGTC CACCGACCCG
ACCGACCCGA CCGATCCCCA AGTTGCCCCG CCCATCACGT CGGTGGTCCG GCTGCACGGC
AAGGGAGCCA AGGAGCGGCT AGTCCCGGTC GGTTCCTTCG CCCTCCGCGC CCTGGAGGCC
TACCTGGTGC GGGGCCGGCC GGTGCTGGCC GCGGCCGGTC GGGGCGCCGG CCCGGCCCGC
GGTGCGCTGT TCCTCAACAT TCGCGGCGGC CGGCTGTCCC GGCAGAGCGC CTGGCAGGTG
CTGGCCGACG CCGCCCGCCG GGCCGGGCTG CCGGCGTCCG GTGTCTCCCC GCACACGCTG
CGGCACTCGT TCGCGACCCA CCTGCTCGAA GGCGGCGCCG ACGTCCGGTC GGTGCAGGAG
CTGCTGGGCC ACGCCTCGGT GACCACCACG CAGATCTACA CCCTGGTCAC CGTCGACGCG
CTGCGCGAGG TCTACGTCAC CGCGCACCCG CGGGCCCGCT AG
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| Protein sequence | MSVNPAREAV ASPVEPSPEL VAALRGYLDH LVVERGVARN TVLSYRRDLN RYLQFLAAAG
RTRVADVTAA DVSDFLVCLR TGADGRPPLA ASSAARAVVA ARGWHRFLLN EGTAEADPSR
DVHPPTPARR LPKALPVEAI GRLLDAAGSA DPDGPRGLRD RALLELLYAT GARISEVVGL
DVDDIDLGPG RLAGRSSTDP TDPTDPQVAP PITSVVRLHG KGAKERLVPV GSFALRALEA
YLVRGRPVLA AAGRGAGPAR GALFLNIRGG RLSRQSAWQV LADAARRAGL PASGVSPHTL
RHSFATHLLE GGADVRSVQE LLGHASVTTT QIYTLVTVDA LREVYVTAHP RAR
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