| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_4054 |
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| Symbol | |
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| ID | 8449674 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | - |
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| Start bp | 4468382 |
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| End bp | 4469131 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 645043098 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_003203333 |
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| Protein GI | 258654177 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.51659 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGATC GAAGCGAGGC CGCCGACGAC GGCGTGCGAC TGCAGAAGGT GCTCGCCTCG
GCGGGTGTCG CGTCGCGCCG CAAGGCCGAG GAACTGATCC GGGACGGCCG GGTGAAGGTC
GACGGCATCG TGGTGCGCGA GATGGGCACC CGGATCGACC CGGAGAACGC CGTCGTGCAC
GTCGACGGGA ACCGGATCAC CACCCGCACC GACCTGGTGT ACCTGGCGTT GAACAAGGAA
CGCGGCGTGC TGTCGACCAT GTCCGACGAG TTGGGGCGCC CGCACATCGG GCAGATGCTG
GAGGACCGCT CGGAGCGGCT GTTCCACGTC GGCCGGCTGG ATATGGAGTC CGAGGGTCTG
CTGCTGCTGA CCAACGACGG TGACCTGGCC CACCGGCTCA CCCACCCGTC CTACGGGGTG
GCCAAGACCT ACGTGGCCGA GGTGCCCGGA CCCATCCCGA AGGACCTGGG TCGCCGGCTC
AAGGCCGGGG TCGAGCTGGA GGACGGTCCG GCCAAGGTCG ACTCGTTCGA TGTGATGGAC
CTGCACCACA ACCGGGCGGT TGTCGAGGTC GTCATCCATG AGGGGCGCAA GCACATCGTG
CGGCGGCTGC TGGAAGCGGT GGACCGGCCG GTGTCCCGGC TGGTGCGCAC CCAGATCGGA
CCGGTGCAGC TGGGTCATCA GCGGCCCGGC ACCCTGCGCA AGCTCAACCC GGTCGAGGTC
TCGCAGCTGT ACAAGGCGGT CGGGCTGTGA
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| Protein sequence | MSDRSEAADD GVRLQKVLAS AGVASRRKAE ELIRDGRVKV DGIVVREMGT RIDPENAVVH
VDGNRITTRT DLVYLALNKE RGVLSTMSDE LGRPHIGQML EDRSERLFHV GRLDMESEGL
LLLTNDGDLA HRLTHPSYGV AKTYVAEVPG PIPKDLGRRL KAGVELEDGP AKVDSFDVMD
LHHNRAVVEV VIHEGRKHIV RRLLEAVDRP VSRLVRTQIG PVQLGHQRPG TLRKLNPVEV
SQLYKAVGL
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