| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_4042 |
|---|
| Symbol | |
|---|
| ID | 8449661 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | - |
|---|
| Start bp | 4455976 |
|---|
| End bp | 4456641 |
|---|
| Gene Length | 666 bp |
|---|
| Protein Length | 221 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 645043087 |
|---|
| Product | transcriptional regulator, TetR family |
|---|
| Protein accession | YP_003203323 |
|---|
| Protein GI | 258654167 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.229679 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.106608 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACA GTCCCGGCCG TGGACGGCCC TACCGATCCG AGCTCCGCCA AGAGCAGGCG
GCCCGGACGC GGCTACGGGT GGTCCAGGCG GCCGTGCGGC TGTTCGGCCG CGACGGGTAC
CGGGCTACCA CCTTCACCCA ATTGGCCAAG GAAGCCGGGG TGTCGGTCAA AACGGTGCAG
GAACACGGCC CCAAGGCCGA TCTGCTGCAG GCGGCCGTCG AGCTGGCGTC GTTCGGGGTG
GAGGGCGAGA CCGATTTCTT CGCCACCGAT CTCGGGCGAG CGGTGCTGCA GATCCGCGAC
CCGGGCGAGC TTGCGGTGAT GGTCGGCGAG GCGATGCTGG CCATCAACAC CCCGTCGGCC
GGCCTGTGGA TGACCTTCGT GGCGGCGGCT CAAGGTGATG CCGAACTCAG CGGTTACCAC
GCGCGGATGC TGGCGCTGAT CCGCGGACAG GTTCAGCACG TCCTGGACTA TGTCAACGAT
CAGGGCTGGC TCCGTCGCGA CGTCCCGTTC GATGACCTCG TCGAGGCATT CTGCGTAGTC
ACCTGTATCG AGACCTTCGT GCGGTTCGTC CACCACGACG GGAAGTCCCC CGACCAGTAC
AAGGCCTTCG TGGCGCGGAC CATCGGGGAG TCGATCCTTG CCTCCGGCAC CCGTCCGATG
CCCTGA
|
|---|
| Protein sequence | MTDSPGRGRP YRSELRQEQA ARTRLRVVQA AVRLFGRDGY RATTFTQLAK EAGVSVKTVQ
EHGPKADLLQ AAVELASFGV EGETDFFATD LGRAVLQIRD PGELAVMVGE AMLAINTPSA
GLWMTFVAAA QGDAELSGYH ARMLALIRGQ VQHVLDYVND QGWLRRDVPF DDLVEAFCVV
TCIETFVRFV HHDGKSPDQY KAFVARTIGE SILASGTRPM P
|
|---|
| |