| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_3997 |
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| Symbol | |
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| ID | 8449616 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | + |
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| Start bp | 4413526 |
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| End bp | 4415406 |
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| Gene Length | 1881 bp |
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| Protein Length | 626 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 645043042 |
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| Product | drug resistance transporter, EmrB/QacA subfamily |
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| Protein accession | YP_003203278 |
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| Protein GI | 258654122 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2271] Sugar phosphate permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.00240753 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.239181 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGACG CCCCTGCCAC CGTGCCATCG AGTGGGCCAT CGAGTGGGCC ATCCGGCGCG
ACCGGTGCGC CACCGGCCGC CGCCGCGGGC CAGGCCGGTT TCTACCCCAA GCGCTGGAAG
GCGCTGTCGG TCCTGGTCGT CGGCCTGCTG GTGGTCATTC TGGACAACAC GATCCTCAAC
GTCGCCCTCA AGACCATCCA GATCGATCTC GACGCCACCC AGAACGAGCT GGTCTGGGCG
ATCAACGCCT ACTCCTTGGC CTTCGCCGCG TTGCTGTTCA CCTGGGGCGT GCTCGGCGAC
CGGTTCGGCC GCAAGCGGAT CCTGTTGATC GGGCTCGTGC TGTTCGGCTT CGCCTCGGCC
CTGTGCGCCT TCGCCTCGAC GCCGGGCCAG CTCATCGCCT TCCGGGCGCT GATGGGCGTG
GGCGGGGCGT CGGTGATGCC GATCTCGCTG TCGATCATTA CCGTCATCTT CCCGCCGCAG
GAGCGGGGCC GGGCCATCGG CGTGTGGTCG GCCGCGGTCG GCGCCGCGGT GGCGATCGGT
CCGGTCCTGG GTGGGCTGCT GCTCGAGCAC CCGAACTGGT TCAACTGGCT GACCGGCAAC
GACTGGGGGT CGGTGTTCTT CATCAACGTC CCGGTGGTGA TCGTCGGGAT CATCGGCATC
GTCATCCTGG TGCCGGAGAC CAAGAACGAG CATCCCGGGC GGCTGGACCC GGTTGGCCTG
GTGCTGTCGG TGGCCGGCCT ATTCACCGTT GTGTACGGCA TCCAGAACGC CTCCGAGGTC
GGCTGGGCGT CGCCGTCGAC CTGGGGATTC GCCCTGCTCG GCCTGGCCAT CCTGGCCGTC
TTCGTCCTCT ACGAGCACCG CAGTACGCAT CCGTCGATCG ATCTGTCCCT GTTCCGCATC
CGGTCGTTCT CGGTGCCGCT GACCGGCGTC ACGCTGGCCT TCGCGGCCAT GCAGGGCACC
CTGCTGTTCC TGACCTTCTA CTACCAGATC GTCCGCGGCT GGAGCCCGCT GCAGGCGGGC
CTGCTGGTGC TGCCGTTCGC CGTGGGCCAG TTGCTGGGTG CTCCGCGCAG CGCCGGCATG
GTCAAGCGTT TCGGCGCCCG TGTGGTGATC CCGGTCGGTC TGGCCTTCGC CGCCGCCGGC
ATGGTGTTCT TCTCGGTCGT CACCCCCGAC ACCCCGGTGT GGATGCTGGT GGTGCTCGGC
GTGGTCTTCG GGTTCGGCCT GGGCAACACA ATCGCCCCCT CCACCACCCG GATGACCCTG
GCCACCCCGC CGGCGCGGTC CGGCTCCGGC TCGGCGGTGC AGAACACCGT CCGGCAGGTC
GGCGCCGTGT TCGGGGTGGC GATCCTGTCC TCGATCGTGA CCACCGTCTA CAGCAACAAC
ATCACGCCGC TGCTGGAGGG CCGGGGCCTG CCCAGCGCGG CTTTCGATGC CGCCACCGAG
TCGATCGGCG GAACCAACGA GGTCGCCGAT CGGTTGGCCG CCAGCGGCGC GGTGCCGCCG
CAGGCGATCG CCCAACTGCG CCAGGCCTCC ATCGACTCGT TCATGCCCGC GCTGCACACC
GCGACCTTGT TCTCGGTCGG CCTCCTGCTG ATCGCGCTGA TCATCGTGGT GGTCTGGCTG
CCGACGAAGG CGCAGGCGGC GGCCTGGGGC GCCCCGTCCG CGCGCCCGTC CGCGCCGCCG
GCCGCGCCCC CGGCCGCAGA CGCGGTTCCG GACCAGGCGC CGGTCGCCGC GACCGCCCCG
GTGCCCGTGG CGGTGAGCGC TGCCACGACC GGCGGCGGGC GTCATGCCGC GCCCGACGAG
GCTCCGGCGG GCCCACCGGC CGGCGCGCAT GCCGTCGGCC GGCACGCGCG GACCGAGGAC
GGCGGGACGG AGGGACGGTG A
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| Protein sequence | MSDAPATVPS SGPSSGPSGA TGAPPAAAAG QAGFYPKRWK ALSVLVVGLL VVILDNTILN
VALKTIQIDL DATQNELVWA INAYSLAFAA LLFTWGVLGD RFGRKRILLI GLVLFGFASA
LCAFASTPGQ LIAFRALMGV GGASVMPISL SIITVIFPPQ ERGRAIGVWS AAVGAAVAIG
PVLGGLLLEH PNWFNWLTGN DWGSVFFINV PVVIVGIIGI VILVPETKNE HPGRLDPVGL
VLSVAGLFTV VYGIQNASEV GWASPSTWGF ALLGLAILAV FVLYEHRSTH PSIDLSLFRI
RSFSVPLTGV TLAFAAMQGT LLFLTFYYQI VRGWSPLQAG LLVLPFAVGQ LLGAPRSAGM
VKRFGARVVI PVGLAFAAAG MVFFSVVTPD TPVWMLVVLG VVFGFGLGNT IAPSTTRMTL
ATPPARSGSG SAVQNTVRQV GAVFGVAILS SIVTTVYSNN ITPLLEGRGL PSAAFDAATE
SIGGTNEVAD RLAASGAVPP QAIAQLRQAS IDSFMPALHT ATLFSVGLLL IALIIVVVWL
PTKAQAAAWG APSARPSAPP AAPPAADAVP DQAPVAATAP VPVAVSAATT GGGRHAAPDE
APAGPPAGAH AVGRHARTED GGTEGR
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