| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_3992 |
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| Symbol | |
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| ID | 8449611 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | - |
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| Start bp | 4408713 |
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| End bp | 4410545 |
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| Gene Length | 1833 bp |
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| Protein Length | 610 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 645043037 |
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| Product | RNA binding metal dependent phosphohydrolase |
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| Protein accession | YP_003203273 |
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| Protein GI | 258654117 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1418] Predicted HD superfamily hydrolase |
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| TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG
[TIGR03319] conserved hypothetical protein YmdA/YtgF |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.748921 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.498171 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCCGACG CTCTCGTCAT TGCCCTGATT CTGGCGCTGC TGGTGGCGGT CGGTGCTGTG
GTGGCATTGG CCCGACGCAA GCCGGTGGCC CCGCCACCGG CCGTGGACGA GGACTCGCTG
CGTCGCCTGC TGGACGAGGC GGTCAGCCGC AGCGCGTCCG AAGTCAAGCC GGCCGCCGAG
CCCGACCTGG GCCGGTTCGC CCTACTCAGC CACGAGGCGC AGGCCGCCGC CGAGGCGGCC
GACGCCGTCC GCCGGACCGC GGCCGAGGCC GCCGAGGAAC TGTCCGTGCG CACCCGGCGG
GACGCCGAGC AGCTGCGCCA GGACGCCCAG GCCGAGGCGC AGCGCACGAT TGCGGCCGCC
CGGGCCCAAG CGGCCGAACT ACGCGCCGGC CTGGAGAACG AGCGCACCCG GATCGCCGGC
GAGGCCACGG CCGCGCTCGC CCAGGACCGC AAGGAACTGC AGGAGGCCGA GCAGCGGCTG
CGGGCCGCCA CCCAGGCCCT GGCCGACGAG CAGCATGCCC TGGTCGCCGA CCGGCGCCGC
ATCGGCAGCG AGAGCAGCGA GTTGGCCTCG GCCAAGCGGG CGCTGGAGGC CAAGGCCGCC
GCCCTGGCCG AACAGGAGGC CGACCTGCGC AAGCAGGCCG GCGCCTTGGA CCAGCGCGAA
CGCGACCTGG CCGCCGCCGA CGCGGCCCGG GAGGCCGAGC TGGTCCGGAT CTCCGGGCTC
ACGGTCGAGG CGGCCCGGGC CGAGCTGCTG GCCGGCCAGG AGGAAGCGGT CCGCCGGGAC
GCGGCGATGA TGATCCGCCG CATCGAATCC GAGGCCCAGA ACTCGGCCAA GCAGCGGGCT
CGGGCGATCG TCGCCGAGGC GATCCAGCGG GTGGCCTCGG ACCAGACCGC CCAGACCGTG
GTGGCCGTGG TCCACCTGCC TGCCGACGAG GTCAAGGGCC GCATCATCGG CCGCGAGGGC
CGCAACATCC GCGCGTTCGA GACGGTCACC GGCGTCAACG TCATCATCGA CGACACCCCC
GAAGCAGTCC TGCTGTCCTG CTTCGACCCG GTCCGCCGGG AGATCGGCCG CATCACCCTG
GAGATGCTGA TCGACGACGG CCGGATCCAC CCGCACCGCA TCGAGGAGGC CTTCGAACGG
GCCCGCGACG AGGTCGACGT GCTCTGCCGG CGGGCCGCCG AGGACGCCAT GCTCGACGTC
CGCATCACCG ACCTGCACCC GGAGCTGGTG GCCCTGATCG GGCGGCTGAA GTACCGGACC
TCCTACGGCC AGAACGTGCT CGGCCACCTG GTCGAGACCG CGCACATCGC CCGGGCCATG
GCCGCCGAAC TGGGCATCGA TCCGACCGTG GTCACCCGCG GTGCCTTCCT GCACGACATC
GGCAAGGCGC TGACCCACGA GGTCCCCGGC TCGCACGCCC TGATCGGGGC CGACCTGGCC
CGCAAGTACG GCGAGTCCGA CGAGGTCGTG CACTGCATCG AGGCCCACCA CGACGAGGTG
GCCCCCAGCA CCGTCGAGGC CGTGCTCACC CAGGCGGCCG ACGCCTGCTC GGGCGGCCGG
CCCGGTGCCC GCCGCGAGTC GCTGGAGTCC TACGTGCAGC GACTGGAGCG GATCGAGGCC
ATCGCCGGCG CCAAGAAGGG CGTGGAGAAG GTCTTCGCCA TGCAGGCCGG TCGCGAGCTG
CGGGTCATGG TCAAGCCGGA CATCGTCGAC GACGTCGAGG CGCACATCCT GGCTCGCGAG
GTGGCCAAGC AGATCGAGGA GGAGCTGACC TACCCCGGTC AGGTCCGGGT CACCGTCATC
CGAGAGTCCC GGGCCACCGA GATCGCCCGC TAG
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| Protein sequence | MSDALVIALI LALLVAVGAV VALARRKPVA PPPAVDEDSL RRLLDEAVSR SASEVKPAAE
PDLGRFALLS HEAQAAAEAA DAVRRTAAEA AEELSVRTRR DAEQLRQDAQ AEAQRTIAAA
RAQAAELRAG LENERTRIAG EATAALAQDR KELQEAEQRL RAATQALADE QHALVADRRR
IGSESSELAS AKRALEAKAA ALAEQEADLR KQAGALDQRE RDLAAADAAR EAELVRISGL
TVEAARAELL AGQEEAVRRD AAMMIRRIES EAQNSAKQRA RAIVAEAIQR VASDQTAQTV
VAVVHLPADE VKGRIIGREG RNIRAFETVT GVNVIIDDTP EAVLLSCFDP VRREIGRITL
EMLIDDGRIH PHRIEEAFER ARDEVDVLCR RAAEDAMLDV RITDLHPELV ALIGRLKYRT
SYGQNVLGHL VETAHIARAM AAELGIDPTV VTRGAFLHDI GKALTHEVPG SHALIGADLA
RKYGESDEVV HCIEAHHDEV APSTVEAVLT QAADACSGGR PGARRESLES YVQRLERIEA
IAGAKKGVEK VFAMQAGREL RVMVKPDIVD DVEAHILARE VAKQIEEELT YPGQVRVTVI
RESRATEIAR
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