| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_3971 |
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| Symbol | |
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| ID | 8449590 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | + |
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| Start bp | 4383266 |
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| End bp | 4384318 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 645043016 |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_003203252 |
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| Protein GI | 258654096 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.182523 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0264597 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCGTT CCAAGGTCCT CACTGCCACC GCGGTCGGCG CGTTCGCCGT CATGCTCACC
GTGGCGGGCT GCTCGTCCTC CAAGCCGGAA TCCAGCGCGG GCACCTCGGC CGGTTCGGGC
TCGGCCGCGG CGGCCACCGC CAGCGCCGCG ACCGGGTCGG TGGCCGCGCC GACCAAGGCC
GGCAAGGACT ACAACGTGGC GTTCATCCAG GGTGTCGCCG GCGACGAGTT CTACATCACC
ATGCAATGCG GCATCGAGGC CGAGGCGGCC AAGCTGGGCG TCACGGTGAA CACGCAAGGC
GGCCAGAAGT TCGACCCGAC GCTGCAGACC CCGATCCTGG ACTCGGTCGT GGCCAGCAAG
CCCGACGCGA TCCTGATCGC GCCGACCGAT GTCACCGCCA TGCAGAGGCC GCTGGAGAAC
GCGGCCGCCG CCGGCATCAA GGTCGTCTTG GTCGACACCA CCACCGAGGA CCCGTCGTTC
GCCGTCTCCC AAGTCTCCTC GGACAACGAA GGCGGCGGCG CCGCCGCGTT CAAGGCCATC
AAGGACAAGA ACCCCAACGG CGGCAAGGTG CTGGTCATCT CCACCGACCC CGGCATCTCT
ACCGTCGACG CCCGGGTGAA GGGCTTCGAG GACGCGGTCG GCAAGGATTC CACGTTCGAC
TACCTGGGCG TGCAGTACTC GCACAATGAC CCGGCCACGG CCGCCCAGCT GGTCACCGCG
GCCCTGCAGA AGGACCCCGA CATCGTCGGC ATCTTCGCCA CCAACATCTT CTCCGCGGAG
GGCTCGTCCA CCGGCGTCAA GCAGGCCGGC AAGAGCGACC AGATGACGAT CGTCGGCTTC
GACGCCGGCC CGAACCAGGT CAAGGCGCTC AAGGACGGCA CCGTCCAGGC GCTGGTCGCG
CAGCAGCCCG CCACCATCGG CACCGACGGG CTGGATCAGG CGATCGCCTC GCTCGACGGC
GGCACCATCA CCCCCAAGAT CCAGACCGGC TTCACCATCA TCACGGCCGA TAACGTCGAC
TCCTCGGATG CGGTCTACAA GTCCTCCTGC TGA
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| Protein sequence | MKRSKVLTAT AVGAFAVMLT VAGCSSSKPE SSAGTSAGSG SAAAATASAA TGSVAAPTKA
GKDYNVAFIQ GVAGDEFYIT MQCGIEAEAA KLGVTVNTQG GQKFDPTLQT PILDSVVASK
PDAILIAPTD VTAMQRPLEN AAAAGIKVVL VDTTTEDPSF AVSQVSSDNE GGGAAAFKAI
KDKNPNGGKV LVISTDPGIS TVDARVKGFE DAVGKDSTFD YLGVQYSHND PATAAQLVTA
ALQKDPDIVG IFATNIFSAE GSSTGVKQAG KSDQMTIVGF DAGPNQVKAL KDGTVQALVA
QQPATIGTDG LDQAIASLDG GTITPKIQTG FTIITADNVD SSDAVYKSSC
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