Gene Namu_3953 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_3953 
Symbol 
ID8449572 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp4362243 
End bp4363616 
Gene Length1374 bp 
Protein Length457 aa 
Translation table11 
GC content63% 
IMG OID645042998 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003203234 
Protein GI258654078 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2211] Na+/melibiose symporter and related transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.210656 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAACG AGTCCACATC GGCCAACCTG CAGCACATGT CGGTCGTCCG GACCAAACCG 
CTGATGACCA TGCCGCAGAT TCTGATCATG AATCTCGGCT TTTTCGGAAT CCAGTACAGC
TTCGGGTTGC AGCAGACCGC CATCAACCCG GTGTACGAAT TCCTCGGCGC GAACCCGCAC
GATCTGCCGA TCCTCAACCT CGCCGGCCCG ATCACGGGTC TGCTGATCCA GCCATTGATC
GGCGCGCTCT CGGACCGGAC GTGGAGTCCA CGCTGGGGCC GCCGGAAGCC GTTCTTCCTC
GTCGGCGCGA TCGGCTGCAG CCTGTGCCTG TTCTTTTTCC CGTTCGTGAC CGCCGTCTGG
ATGGCCGTGA TCCTGCTGTG GCTGCTGGAC GCGAGCAACA ACACCGCGAT GGAGCCCTAC
CGCGCCTTCA TCGCCGACAA ACTGCCGCCG TCCCAACTGG GCAAGGGCTT CCTCGCCCAG
TCGTTCTTCA CCGGCCTGGG CATCACGCTG GCCAACATCT CGCTGTTCGT TTTTCAGAAG
TTCATCACCG GGGCCACCGC GGCCGGCATT CCGTACTGGG TGGTCGGCTC CTTCATGCTC
GGCGCCGTCT GCTCGATCGG CACGGTGCTG GTCTCGGTCC TGCGGACCAA GGAGATCCCG
CCCAGCGACG AGGAACTCGC GGCGTTGCGG GCCAAGAAGG GCGGCCTCGG TCCGGCCGTC
AAGGAAATCG GCGAGGCGAT CGTCGATATG CCCCCGCCAC TGCGCAAGCT GGCGCTGGTG
TATTTCTTCC AGTGGTACGG CATGGTCTGC TACTGGCAGT TCATCGCGCT GTCCATCGCC
AAGTCGTCCT TCCCCGATAC GCCGGAGGGC AAGGAAGAAG CGGTGGCGTG GACCGGCCTG
GTCAACGGCT GGTACAACAT CGTGACGTTC TGCGTGGCGT TCTCGCTGGT GTCGTTCGCC
AAGCGGCGGG GGGCCCGAAC GGTGCATTGC GTGTGCCTGC TGCTCGCCGC CGCCGGCCTG
ATGATCGTGC CGTCGATCAC CAACCAGTAC CTGATCTTCA TCCCCATCAT CGGACTCGGC
ATCGCGTGGG CCTCGATCAT GGGCGTGCCC TACATCATGG CGGTCCGGAT GATCCCGTCG
ACCCGCTTCG GGGTCTACAT GGGCATCATC AACATGATGA TCGTCATCCC GATGCTCATC
CAGTCGCTGA CGTTCGGGCC GATCTACGAG AACTTGCTGG GGGACAACCC CAACAATGCG
ATCCGGTTCG CCGCCGTCTT CCTCGGAATT GCCGGCGTTC TCATGCTGTG GATCAAGGAA
CCGCCGATCG TCCGCGATGT GGACGACGTC GCGTTCATCC CGGCTGGGCA CTGA
 
Protein sequence
MSNESTSANL QHMSVVRTKP LMTMPQILIM NLGFFGIQYS FGLQQTAINP VYEFLGANPH 
DLPILNLAGP ITGLLIQPLI GALSDRTWSP RWGRRKPFFL VGAIGCSLCL FFFPFVTAVW
MAVILLWLLD ASNNTAMEPY RAFIADKLPP SQLGKGFLAQ SFFTGLGITL ANISLFVFQK
FITGATAAGI PYWVVGSFML GAVCSIGTVL VSVLRTKEIP PSDEELAALR AKKGGLGPAV
KEIGEAIVDM PPPLRKLALV YFFQWYGMVC YWQFIALSIA KSSFPDTPEG KEEAVAWTGL
VNGWYNIVTF CVAFSLVSFA KRRGARTVHC VCLLLAAAGL MIVPSITNQY LIFIPIIGLG
IAWASIMGVP YIMAVRMIPS TRFGVYMGII NMMIVIPMLI QSLTFGPIYE NLLGDNPNNA
IRFAAVFLGI AGVLMLWIKE PPIVRDVDDV AFIPAGH