Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_3929 |
Symbol | |
ID | 8449548 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 4336890 |
End bp | 4338491 |
Gene Length | 1602 bp |
Protein Length | 533 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 645042975 |
Product | UDP-N-acetylmuramyl-tripeptide synthetase |
Protein accession | YP_003203211 |
Protein GI | 258654055 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0769] UDP-N-acetylmuramyl tripeptide synthase |
TIGRFAM ID | [TIGR01085] UDP-N-acetylmuramyl-tripeptide synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.00450416 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.199175 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGGCGAGG TCGCCGCCCT GACCGGGGCG CGCCTGGAAC GGCCCGCCCC GACCGGTGAG CGGCTGACCG GGATCACCCT GCGCGCCCAG GACGTCCGGC CGCACGACCT GTTCGCCGCC CTGCCCGGCA GCCGCGCGCA CGGGGCCGGC TACGCCGGCC AGGCCCTGGA GCGGGGCGCG GCGGCCGTGC TGACCGACCG GGCCGGGGCC GAGCTGCTGG CCGGCACCGA CCTGGGGTCG GTCGCGCTGC TGGTGGTCGA GCGTCCGCGC GAGCACCTCG GGGCGATCGC CCGGCAGCTG TACGGCGACC CCAGCCGCCG GCTGGCCGTC GTCGGCGTCA CCGGCACCTC GGGCAAGACC ACCACCTGCT ACCTGCTGGA GGCCGCACTG GCCGCCGACG GCTCGCGCAG CGCCGTCATC GGCACCGTGC AGACCCGCAT CGACGGGCAG ATCACGCCCA GCGCGCTGAC CACGCCGGAG GCGCCGGACC TGCAGGCCCT GCTGGCCGTG ATGGTCGAGC GGGGCGTCGG CGCGGTGGCC ATGGAGGTCT CCTCGCACGC GTTGTCGCTG GGCCGGGTCA GCGGCACCCG GTTCGCGGTC GGCGCCTTCA CCAACCTGTC CCAGGACCAC CTGGACTTCC ATCACGACAT GGAGGACTAC TTCCGGGCCA AGGCGATGCT GTTCGACGGG CGCGCGGGCG CGCACGTCAT CGACGTGGAC ACCGAGTACG GCGCCCGGCT GGCCGCCGAG CACCCGGAGG CGCTGACCGT CAGCGACCGG CCGGGCGCGG CCGACTGGTC GGTCGAGATG GTCACGCTGG CGGCCAACGG GGTGCAGCAC GTGGTGCTGT CCGGGCCGGG GAAGCGCCAG GTCACCCTGG ACCTGGCCAT CCCCGGCGCG TTCAACGTCG GCAACGCCGC CGTGGCGCTG GCCTGCGTGG ACGCGCTGGG CCGGGACGTG CAGCAGGCGG CCGACGCGCT GGCCACCGTG GTGGTGCCGG GCCGGATGGA GCGGGTGGAC GCCGGGCAGG ACTTCCTGGC CGTCGTGGAC TACGCGCACA AGCCCGGCGC GGTGGCCGCC GTGCTGGACG CGATCGGGCA GGGGCTGGCC GGGCCGCTGA TCGTGGTGCT CGGGGCCGGC GGCGACCGGG ACACCGGCAA GCGGCCGATG ATGGGCGCCG AGTCCGCCGC CCGTGCCGAT GTGCTGATCG TCACCGACGA CAATCCCCGC TCCGAGCGGC CGGCCGACAT CCGCGCCCAG GTGCTGGCCG GGGCCGCCCC GGTGGCCGAC CGGCGCCCCT GCCAGGTGCT GGAGATCGGC GACCGGCGGG CGGCGATCCG TCGGGCCGTG CAGCTGGCCG GCACCGGCGG GGCCGTGGTG ATCGCCGGCA AGGGCCACGA ACAGGGCCAG GAGATCGACG GCGTGGTGCA TCCCTTCTCC GATCGGGACG AGCTGCGGGC CGCCCTGGTC GCCCTGGTCG AGCCGGCCGG ACGGGCCGGT GTCGGTCCCG GTGGTCCCGG CGGTCACGAC CTGTCGGCCG GGCCGACTAG CCTGCACCGC GTGACCGATG CGCCCGCCGA CCGCAATCCG AGCAGCCGAT GA
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Protein sequence | MGEVAALTGA RLERPAPTGE RLTGITLRAQ DVRPHDLFAA LPGSRAHGAG YAGQALERGA AAVLTDRAGA ELLAGTDLGS VALLVVERPR EHLGAIARQL YGDPSRRLAV VGVTGTSGKT TTCYLLEAAL AADGSRSAVI GTVQTRIDGQ ITPSALTTPE APDLQALLAV MVERGVGAVA MEVSSHALSL GRVSGTRFAV GAFTNLSQDH LDFHHDMEDY FRAKAMLFDG RAGAHVIDVD TEYGARLAAE HPEALTVSDR PGAADWSVEM VTLAANGVQH VVLSGPGKRQ VTLDLAIPGA FNVGNAAVAL ACVDALGRDV QQAADALATV VVPGRMERVD AGQDFLAVVD YAHKPGAVAA VLDAIGQGLA GPLIVVLGAG GDRDTGKRPM MGAESAARAD VLIVTDDNPR SERPADIRAQ VLAGAAPVAD RRPCQVLEIG DRRAAIRRAV QLAGTGGAVV IAGKGHEQGQ EIDGVVHPFS DRDELRAALV ALVEPAGRAG VGPGGPGGHD LSAGPTSLHR VTDAPADRNP SSR
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