| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_3928 |
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| Symbol | |
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| ID | 8449547 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | - |
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| Start bp | 4335361 |
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| End bp | 4336893 |
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| Gene Length | 1533 bp |
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| Protein Length | 510 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 645042974 |
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| Product | UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6- diamin opimelate/D-alanyl-D-alanylligase |
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| Protein accession | YP_003203210 |
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| Protein GI | 258654054 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
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| TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.340087 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.271745 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGCGC TGACCCTGGC TCAGATCGCC GACGAGATCG GGGTTCCCGT GCCCGCCGGA
GCGGCGGACG TGCTGGTGAG CTCGGTCGAG TTCGACACCC GCCGGATCCG CCCGGGGGCG
TTGTTCGTCG CCCTGCGCGG CGAGCGGGTG GACGGGCACG ACTTCGCCGC CACGGCCGCC
GCCGCCGGCG CGGTGGCGGT GCTGGGGTCG GCCCCGGTGT CGGCCCCGCT GCCGCTGCTG
CAGGTGCCCG ACCGCCCCGA CAACGCCGGC GTGCTCGACG CGTTGGCCGC CCTGGCCCGG
GCGTCGGTGA CCGCGCTGGT CCGCGAGCAC GGCCTGCAGG TCGTCGGCGT CACCGGGTCC
TCCGGCAAGA CCTCGACCAA GGACCTGATC GCGGCCGTCC TGCGCGCCGT GCCGGGGACC
GGTCCCGAAC GGGTCATCGC CCCGCCGGAG TCGTTCAACA ACGAGCTGGG CCACCCGTAC
ACCGCACTGC GGGCCGACGA GAGCACCGCG TTCCTGGTGC TCGAGCTGTC CGCGCGGGGC
GCCGGCCACA TCGCCGCGCT GGCCCGGGTC GCGCCGCTGC GGATCGGGGC CGTGCTCAAC
GTCGGCTCCG CCCACCTGGG CGAGTTCGGG TCGGTCGAGG CCATCGCGCA GGCCAAGTCC
GAGCTGGTCC AGTCCTTGCC CCCGGCCGGT GCCCAGCCGC TGACGGGTGG GGTGGCGATC
CTGAACGCCG ACGACGCCCT GGTCGCGGCG ATGGCCGAAC TGACCGCGGC CGAAGTGGTC
ATGGTCGGCA CGGGCGCGGC GGCCCAGGTG CGGGCCACCG ACGTCGGCCA GGACGACGCC
GACCGGGCCC GGTTCACCCT GGTCACCCCG GAGGGGTCGG CCCCGGTGAC GCTGCGCGTG
GTCGGCGCGC ACCAGATCGG CAACGCGTTG ACCGCGGCCG CGGTCGGTCG CGCGGTCGGG
CTGGGCCCGC AGGCCATCGC CCGCGCGCTG TCGCAGGCCG AGCCGGCGTC GCGGTGGCGG
ATGGAGGTCA CCGAGCTGGC CAACGGCGTC ACCCTGATCA ACGACGCGTA CAACGCCAAC
CCGCACTCGA TGAAGGCCGC CCTGCACTCG CTGTCCACCA TCGGCCGCGG CCGGCGGACC
TGGGCGGTGC TGGGGGAGAT GGCCGAGCTG GGCGACGAGG CGACCGCGGC GCACGACCAG
ATCGGCCGCC TGGTGGTCCG CCTGGGAGTG GACCGGCTGC TGGTGGTCGA GGGGCCCGGC
GCGGCCACCG GGGCCGCCGT GGGCGGCCGC ACGGCCCCGC GGGCGCTGCA CCTGGGCGCG
CACTTGGAGG GGTCGTGGGG TGGCGAGTCG GAGCTGGTGC CCGACGTCGA CGACGCGGTG
GCGATCCTGC TCGACGAACT GGAGCCCGGT GACGTGGTGC TGGTCAAGGC GTCCCGGTCG
GCCGGGCTGG AACGGGTCGC GCTGCGGCTG ATCGAGGCCG TCGGGGCATC GGCCGGCCGG
CTGGCCGGCG ACCGGAAGGA CGGCCCCGCG TGA
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| Protein sequence | MIALTLAQIA DEIGVPVPAG AADVLVSSVE FDTRRIRPGA LFVALRGERV DGHDFAATAA
AAGAVAVLGS APVSAPLPLL QVPDRPDNAG VLDALAALAR ASVTALVREH GLQVVGVTGS
SGKTSTKDLI AAVLRAVPGT GPERVIAPPE SFNNELGHPY TALRADESTA FLVLELSARG
AGHIAALARV APLRIGAVLN VGSAHLGEFG SVEAIAQAKS ELVQSLPPAG AQPLTGGVAI
LNADDALVAA MAELTAAEVV MVGTGAAAQV RATDVGQDDA DRARFTLVTP EGSAPVTLRV
VGAHQIGNAL TAAAVGRAVG LGPQAIARAL SQAEPASRWR MEVTELANGV TLINDAYNAN
PHSMKAALHS LSTIGRGRRT WAVLGEMAEL GDEATAAHDQ IGRLVVRLGV DRLLVVEGPG
AATGAAVGGR TAPRALHLGA HLEGSWGGES ELVPDVDDAV AILLDELEPG DVVLVKASRS
AGLERVALRL IEAVGASAGR LAGDRKDGPA
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