| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_3927 |
|---|
| Symbol | |
|---|
| ID | 8449546 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | - |
|---|
| Start bp | 4334270 |
|---|
| End bp | 4335364 |
|---|
| Gene Length | 1095 bp |
|---|
| Protein Length | 364 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 645042973 |
|---|
| Product | phospho-N-acetylmuramoyl-pentapeptide- transferas e |
|---|
| Protein accession | YP_003203209 |
|---|
| Protein GI | 258654053 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase |
|---|
| TIGRFAM ID | [TIGR00445] phospho-N-acetylmuramoyl-pentapeptide-transferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.0293908 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.527169 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAGGCCA TCCTGGTCGC GGCGCTGGTC GCGCTCGCCG TCTCCATCCT GTTCACCCCG
TACCTGATCA AGGTGTTCTC CCGGCAGGGC TTCGGCCAGG AGATCCGCGA GGACGGCCCG
CAGCACCACA AGAAGAAGCG CGGCACCCCG ACCATGGGGG GTACCTCGAT CCTGATCGCC
ATGTGGTGCG GCTACCTGGC CGCCAAGCTG GTGGACTGGA TCTCCGGCGG CGGCGACGGG
TTCACCGCCT CCGGGCTGCT GCTGCTCTAC CTGACCACCG GCATGGGTCT GGTCGGCTTC
CTGGACGACT TCATCAAGCT CCGCAAGCAG CGCAACCTCG GGCTGAACAA GCGGATGAAG
TTCCTCGGGC AGACGTTCGT GGCCGTCACC TTCGGCATCG GCGCGCTGTT CTTCCCGGGC
GTGGGTGGTC TGACCCCGGC CTCGGCGTCC CTGTCCTACG TGCGGGACCT GACGTTCCTG
TCCATCGGCG CCATCGGTTT CGTCGTGCTG TGCTGGCTGC TGGTCTCGGC CTGGTCCAAC
GCGGTGAACT TCACCGACGG CCTGGACGGC CTGGCCGCGG GCTCCTCGGT GATGGTGCTG
GGCACCTACG TGGCGATCGG CTTCTTCCAG TTCCGCAACG CGTGCTGGAT GCCGCTGTCC
ACCGCCGCGC AGGCCGGCTG CTACGAGGTG CGCGACCCGC TGGACCTGGC GGTGATCGCC
TCGGCCGCGC TGGCCGGCTG CATCGGCTTC CTGTGGTGGA ACGCGCACCC GGCCCGGATC
ATGATGGGCG ACACCGGCTC GCTGGCCCTG GGCGGGCTGA TCGCCGGCCT GTCCATCCTG
ACCAAGACCG AGCTGCTGCT GGTCGTCATC GCCGGGCTGT TCGTGGTCGA GATGCTCTCG
GTGGTCATCC AGATCGCGGT CTTCCGGACC CGTCATGTGC GGGTGTTCAA GATGGCGCCG
TTCCACCACC ACTTCGAGCT GTCCGGGTGG ACCGAGACCA CCGTGATGAT CCGGTTCTGG
CTGCTCGCCG CGATGTCCGC CGCGCTGGGC CTTGGCCTGT TCTACGCCGA GTGGCTGTCC
CTGACCGGAG GCTGA
|
|---|
| Protein sequence | MKAILVAALV ALAVSILFTP YLIKVFSRQG FGQEIREDGP QHHKKKRGTP TMGGTSILIA
MWCGYLAAKL VDWISGGGDG FTASGLLLLY LTTGMGLVGF LDDFIKLRKQ RNLGLNKRMK
FLGQTFVAVT FGIGALFFPG VGGLTPASAS LSYVRDLTFL SIGAIGFVVL CWLLVSAWSN
AVNFTDGLDG LAAGSSVMVL GTYVAIGFFQ FRNACWMPLS TAAQAGCYEV RDPLDLAVIA
SAALAGCIGF LWWNAHPARI MMGDTGSLAL GGLIAGLSIL TKTELLLVVI AGLFVVEMLS
VVIQIAVFRT RHVRVFKMAP FHHHFELSGW TETTVMIRFW LLAAMSAALG LGLFYAEWLS
LTGG
|
|---|
| |