| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_3926 |
|---|
| Symbol | |
|---|
| ID | 8449545 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | - |
|---|
| Start bp | 4332810 |
|---|
| End bp | 4334267 |
|---|
| Gene Length | 1458 bp |
|---|
| Protein Length | 485 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 645042972 |
|---|
| Product | UDP-N-acetylmuramoylalanine/D-glutamate ligase |
|---|
| Protein accession | YP_003203208 |
|---|
| Protein GI | 258654052 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
|---|
| TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.652252 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.248038 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCGA CACCCCCCGC TCCGAGCGTG CTGCCCGGCC CGGGTGACCT GGTCGTGGCC
GCCGGCGCCG GGGTGACCGG CCTGCCGGTG GTCCGCTACC TGGCCGCCCG CGGCGTGCGG
GTGGTCGTCA CCGCCAACCG GGCCGCCCCG GCCGAGCTGG CCGCCATCGC CGGCGACGTC
ACCTTCGCCG GCGACCTGGC CACCCCACCC GCCGGCACCA CGCTGGTGAT CACCTCGGCC
GGCATCCCGC CGACCAACCC GCTGCTGGTG GCGGCCGCCG CCGCCGGCAT CGAGGTCATC
GGCGAGGTGG AGCTGGCCTG GCGGATCGAC CACGACGGCC CGGCGGGCGG CCAGACTGCA
CCGCGACCGT GGCTGGTGGT GACCGGCACC AACGGCAAGA CCACCACCAC CGGCATGCTC
GAATCGATCC TGCGGGCCGC CGGCCGGACG GTGACCGCCT GCGGCAACAT CGGCTGGCCG
GTGCTGGCGG CCGTGCTGGC CGGCGGCCGC GACGCCCTGG ACGACACCCC GCGGCAGGAC
GTGATCGCGG TCGAACTGTC CAGCTTCCAG CTGCACTGGG CGCCGAGCCT GCGGCCGCGG
GCCGGGGTGG TGCTCAACCT GGCGGAGGAC CACCTGGACT GGCACGGTTC GATGGCCGCC
TACGGCGCCG ACAAGGCCCG CGCGCTGGCC GGCGAGATCG CCCTGGCCGT CGTCGACGAC
TCCGGTGCGG CCGGCCTGCT GGCCGGCGCC GGAGCGCCAC GGCGGATCCC GATCACCGCG
GCCGCGCCGG TCGCCGGTCG CCTGGGCCTG GCCGACGGCT GGCTCGTCGA TCACGCGTAT
GCCGCCTCGG CGCAGCGGCT GGCCGCGGCC GAGGCGGTCC GCCCGCCCGG GGCGCACAAC
CTGACCAACG CGCTGGCCGC CGCCGGGCTG GCCCTGGCCG CCGGCGTCCC GGCGCAGGCG
GTGGCCACCG GGCTGGCCGC GTTCGCGCCG GGCGGGCACC GCAACGTGCT GGTCACCCAG
CGGGCCGGTG TGCGTTACGT CGACGACTCC AAGGCGACCA ACCCGCACGC CGCGCTGGCC
TCGCTGCTGG CCTACCCGCG GGTGGTCTGG ATCGCCGGCG GCCAGCTCAA GGGGGCGCAG
GTCGACGAGC TGGTGCTGGC CGTGCGCGAC CGGCTGGCCG GGGTGGTGTT GCTCGGGGTG
GATGCCCCGG TGATCCACGC CGCGGTTTCC CGACACGCCC CCGATGTGCC GGTTCTGCCG
GTGCCCGGGA CGGACGATGA CGTGATGCGC TCAGTGGTCT GCGCGGCCGC CCGGATGGCC
GCACCCGGTG ACGTGGTGCT GTTGGCCCCG GCCGCCGCGT CCCTGGACAT GTTCAGCTCG
TACGCGGCCC GCGGCCAGGC CTTCGCGGCC GCCGCGCTCG ACCTGCCCGA CCAGCCGTCG
GCCGGGTCAT CGGCGTGA
|
|---|
| Protein sequence | MTATPPAPSV LPGPGDLVVA AGAGVTGLPV VRYLAARGVR VVVTANRAAP AELAAIAGDV
TFAGDLATPP AGTTLVITSA GIPPTNPLLV AAAAAGIEVI GEVELAWRID HDGPAGGQTA
PRPWLVVTGT NGKTTTTGML ESILRAAGRT VTACGNIGWP VLAAVLAGGR DALDDTPRQD
VIAVELSSFQ LHWAPSLRPR AGVVLNLAED HLDWHGSMAA YGADKARALA GEIALAVVDD
SGAAGLLAGA GAPRRIPITA AAPVAGRLGL ADGWLVDHAY AASAQRLAAA EAVRPPGAHN
LTNALAAAGL ALAAGVPAQA VATGLAAFAP GGHRNVLVTQ RAGVRYVDDS KATNPHAALA
SLLAYPRVVW IAGGQLKGAQ VDELVLAVRD RLAGVVLLGV DAPVIHAAVS RHAPDVPVLP
VPGTDDDVMR SVVCAAARMA APGDVVLLAP AAASLDMFSS YAARGQAFAA AALDLPDQPS
AGSSA
|
|---|
| |