| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_3910 |
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| Symbol | |
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| ID | 8449529 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | + |
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| Start bp | 4316298 |
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| End bp | 4317560 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 645042956 |
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| Product | Extracellular ligand-binding receptor |
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| Protein accession | YP_003203192 |
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| Protein GI | 258654036 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.420808 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.127498 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCGCC GACGATTGAC CGGCCGGATC GCAGCCGGCA CCCTGGCCAC CGGCCTGCTG
CTGGCCGCGT GTGGCAGCCC CGGTTCGTCG TCCTCGTCGC CGACCACGGC GGCCAGTGCC
GCCAGTGCGG CCGGCGGCGG TTCGGCCGGC GCCTCCGCGC AGGCGGCCAC CGGTGAACCG
ATCAAGGTCG GCGTCGTCAC CTCGCTGTCG GGGCCGCTGC AGTCCTACGG GCAGATGTAC
CTGGACGCCT TCAACGTGTG CCTGGACCAC GCCACCAACG GCACCGGCGC GGTGAACGGC
CGGCCGATCG CGGTGGCCAC CGCCGATGAC GCCGGCGATC CGGCCAAGGC AACCACCGCG
GCCACCGACT ACATCGGCCA GGGCTACCAG ATCCTGGCCG GGTCCGCCTC GTCCGGGGTC
GCCCTGCAGG TCGCCCCGCT GGCCCAGGAG AACCAGGTGC TGTTCATCTC CGGGCCGGCC
GCCACCGACG CCATCACCGG GGTCAACAAG TACACGTTCC GCTCGGGACG CCAGACGTAC
CAGGACATTG CGACCGCGGC GTCCTTCGTG GGCGATCTGC AGGGCAAGAA GGTGACGATC
TTCGCCCAGG ACAGCGCGTT CGGCCAGGCC AACGTGGCCG CGGCCTCGGC CGTCTTCGGC
GCCGAGGGGG CCACCGTCAC CCCGCTGCTG GTGCCGGCGA CCGCGACCGA CCTGGTGCCG
TTCGCCAAGC AGGCCGCCGA CGCCGACCCG GATCTGCTGT TCGTGGCCTG GGCCGGCACC
AACGCCACCC AGATGTGGGA GGCGATGGGC CAGCAGGGCG CGTTCGACGG CACCACCGTG
GTCACCGGTC TGGACATCAA GCCCACCCAC ACCGTTTTCG CTCCGGTCGC GGACAAGCTC
TCGCTGCTGG CCCACTACTT CGACGGCGCC ACCGACAACG AGGTGGAGCA GGCGCTGGTC
GCCGGGCTGA CCGCGGAAGG CAAGACGCAG GATCTGTTCT CGCCGGACGG CTGCAACGCG
GCGTTGATGG TGGTGCGGGC GGCGCAGGAG TCGCCGGACG ACGTGGACGG CATGATCACG
GCGCTGGAGG GCTGGGAGTT CGAGGGTCCC AAGGGCACCA CCACGATCCG GGCCGAGGAT
CACGCGATGC TGCAGCCAAT GTTCCAGACC AAGCTGGCCG ATGTGAACGG CACGCTGACC
CCCGAACTGG TCAAGGAGCT GGCACCGGCG GACACCGCCC CGGCCGCGAC GCCCTTCAAG
TGA
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| Protein sequence | MSRRRLTGRI AAGTLATGLL LAACGSPGSS SSSPTTAASA ASAAGGGSAG ASAQAATGEP
IKVGVVTSLS GPLQSYGQMY LDAFNVCLDH ATNGTGAVNG RPIAVATADD AGDPAKATTA
ATDYIGQGYQ ILAGSASSGV ALQVAPLAQE NQVLFISGPA ATDAITGVNK YTFRSGRQTY
QDIATAASFV GDLQGKKVTI FAQDSAFGQA NVAAASAVFG AEGATVTPLL VPATATDLVP
FAKQAADADP DLLFVAWAGT NATQMWEAMG QQGAFDGTTV VTGLDIKPTH TVFAPVADKL
SLLAHYFDGA TDNEVEQALV AGLTAEGKTQ DLFSPDGCNA ALMVVRAAQE SPDDVDGMIT
ALEGWEFEGP KGTTTIRAED HAMLQPMFQT KLADVNGTLT PELVKELAPA DTAPAATPFK
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