| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_3908 |
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| Symbol | |
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| ID | 8449527 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | - |
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| Start bp | 4311783 |
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| End bp | 4315208 |
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| Gene Length | 3426 bp |
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| Protein Length | 1141 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 645042954 |
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| Product | exodeoxyribonuclease V, gamma subunit |
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| Protein accession | YP_003203190 |
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| Protein GI | 258654034 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1330] Exonuclease V gamma subunit |
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| TIGRFAM ID | [TIGR01450] exodeoxyribonuclease V, gamma subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00208129 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.199175 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGCCTGC ACGTGCACCG CGCCCAGCGC GCCGATGCCC TGGCCGCCGC GCTGGGTGAC
CTGCTGGCCG AGCCGCCGGC CGACCCGTTC GGCGTGGACG TGGTCGCCGT GCCGACCCGA
GGCGTGGAAC GGTGGCTCAC CCAGCGGCTC GCGCACCGGC TCGGCACCCG CGACGGCCGG
TCCGACGGCA TCTGCGCCGC CGTCCGGTTC CCCAGTCCCA CCACGCTGGT CGATGAGCTC
GCCGGCGACC GGGCCGACGA TCCCTGGACG CCGGACGCCG CGGTCTGGCC GCTGCTGGCC
GCCATCGAGG CATCCGTGCA CGAACCCTGG TGCGCGCTGC TGGCCGAGCA CCTGGGCTAC
CGGGGCGACG ATGCCCAGGC CGAGCATCGC CGGGGCCGCC GGTATGCGGT CGCCCGCCGG
ATCGCCGGCC TGTTCGACGG GTACGCCGAA CACCGGCCGG AGATGGTGGC CGCCTGGTCG
CAGGGCGGGG ACGACGACGG CTGGGGCGAG CCGGTGCCGG CGGACCTGAG CTGGCAGCCG
CGGCTGTGGC GGCGGCTGCG CGACCGCATC GACGCCCCCG ACCCGGTGGC CACGTTCGCG
CAGGTAGCGG CGCGGCTGGC GGCCGATCCC GGGGCGGTGG ACCTGCCCGA ACGGGTCAGC
CTGTTCGGCG CGACCGCCCT GCCGCACCGG CAGGTCCTGC TGCTGTCCGC ACTGGCTCAC
CACCGGGACG TGCACCTGTG GTTGCCGCAT CCCTCGCCGG TGCTGTGGGA CCGGGTCGGT
GAGCTGCGCC CGCCCGTCCC GGGCCGGATC CGGCGCCGCG ACGACCCGAC GGCCGGCGCC
GCCACGCACC CGCTGCTGGC CTCGATGGGC CGCGACGTGC GGGAACTGCG CACCGTGCTG
GCCGGCCGGA TCGACCGGGA CACCTGGCAT CGGGCCGACG ATCCACCGGC CACCCTGCTG
GGCCGGTTGC AGCGCGACCT GAGCGACAAC CGCCGCCCGG GACCGGGCAT GGCCGACAAG
CCGGTGGTCG ATGCCACCGA CGACAGCGTC CGGGTGCACG CGGCCCACGG CCCGGGCCGT
CAGGTCGACG TGCTGCGCGA CGTGGTGATC GGCCTGCTGG CCGACGATCC CACCCTGCAC
CCGGCCGACA TCCTGATCAT GTGCCCGGAC ATCGAGGCGT TCGCGCCGCT GCTGCAGGGT
GCGTTCGGGC TGGCCGACTC GGTGCCGGAT GGCCATCCGG CCCATCAGCT GCAGGTTCGG
TTGGCCGACC GGGCGCTGCG CCAGACGAAT CCGCTGCTGG CCACCCTGGA CCGGCTGTTG
GACCTGGCCG GCAGCCGGGT CACCGCCTCC GACGTGCTGG ACTTCGCCGC GTTCGCGCCG
GTCCGGCACC GGTTCGGCTT CGACGACGAC GAACTGAGCA CGCTGGCCGA CTGGGTCGCC
GCGGCTGGCG CCCGGTGGGG GCTGGACGCC GAGCACCGCC GCCGGTACGG CCTGGCCGAG
TACGGACAGA ACACCTGGCG GGCGGCGCTG GACCGGATCC TGCTCGGCGT GTGCATGTCC
GACGAGCCCG GCAACCGGCT CGAGACCGCG CTGCCACTGG ACGAGATCGG CAGCGCCGAC
GTCGATCTCG CCGGCCGGTT GGCCGAGTTG ATCGACCGGC TGGCCACCGT GGTGGACACC
CTGAGCAGCC GGCACAGCGT GCAGCGGTGG TGCGCCGAGC TGCTGGCCGG AGTGCAGAGC
CTGACCTCGG TGCCGGCGCG GGCGGCGTGG CAGGTGGCCG AGTTCCGGGC CGAGGTGGCC
GCCGTGCAGC GGCACGCGGC CGCGGCCGGA TCGACCGGTC TCGAGCTCGG GCTGGCCGAC
GTCCGGGCGC TGCTGGCCGG CGCCCTGGCC GGCCGGCCCA CTCGGGCCAA CTTCCGGACC
GGCACGCTGA CCGTGTGCAC CATGATGCCG ATGCGGTCGG TGCCGCACCG GGTGATCTGC
CTGCTCGGGC TGGACGACGG GGTCTTCCCG CGGGGCGCCC GGGAGGACGG CGACGACTTG
CTCATCCGAG AACCTGCCTG CGGGGAAAGG GATCTGCGTT CCCAGGACCG CCAGCTGATG
CTGGACGCGA TCGTCGCGGC GACCGAGAAG CTGGTCATCA CCTACTCCGG CGCGGACGAG
CGCACCGGCG CCCAGCGTCC GCCCGCGGTG CCGGTGGGCG AGCTGCTCGA CGCGTTGGAC
GACACGGCGA CGACCGCCAC CGGCGGCGCC GTGCGGGACC TGGTGCTGGT GCGCCACCCG
TTGCAGCCGT TCGACGCGCG GACACTCACG GCGGGCGCGC TCGGGCGGGT GGGCCCGTTC
ACCTTTGACC CGGTCGCCCT CGGCGGGGCT CGGGCGCTGG CGGGTCCGCG CCGGCCGGCC
GGCCGGCTGG TCCCCGCGCC GCTGCCGGCC CCCGACCGGC CGCCGGCCGA CGTGGAACTG
GCCGAGGTGA TCGAGGTGCT GACTCACCCG GCCAAGGGGT TCCTGCGGCG CCGGCTCGAC
GTCGCGGTGC CGTTCGAGCA GGACGATCCG CCCGACGACC TGCCGGTCGA TCTGGATGCG
TTGCAGGAGT GGGGGGTCGG TGACCGGATC CTGCGCGACC GGCTGGCCGG GGTGCCCGAG
CAGGAGTGCC GGCAGGCCGA GTGGCGCCGC GGGGTACTGC CGCCGGCCGC GCTGGGCGGC
CGGGCGTTGG AGCGGGTGCT GCGGGACGTG CGGCCGCTGG TGGACCGGAC GGCGACCCTG
CGGGCGGCGC CCCGGCACAC GGTCGAGGTC TCGGTGCCGC TGCCCGACGG GCGTCGGCTG
CGCGGCACCG TCGGCGGGGT GCACGGCATC GGGCTGGTCA CCGTCTCCTA CAGCAAGCTC
GCCCCCCGGG CCCGGCTCCA ATCCTGGCTG GCCTTTCTCG CGCTGACCGC GTCCGACCCC
GCCCTCGCCT GGACTGCGGC GGCCGTCGGT CGGGCCGAGC GTGGCCGCCC GCAGTGCGCC
ACCCTGGCCG CGCTGCCGGG CGAGCGGGCC CGCGAACTGC TGATCGATCT GGTCGGCCTG
TACGAGGAGG GCCTGCGCGC GCCGTTGCCG CTGCCGCTCA AGACCGGTGA GAAGTACGCC
GACGCGCGCC GCCGCGGGAT GGACCACGAC AAGGCGCAGG ACCAGGCCGC CGCCACCTGG
ACCGGCGGCA AGTACCCGGG CGAGCGGCAG GACGCGGCCA ACATGCGGGT CTGGGGCCGT
GACGCCCCGT TCAGCGTGCT GACCGGATCC GGAACGGACC CCGACACCGG CATCGACACC
GGCACCGACC CCGGCATCGA CGCCGACACC GGCACCGATC GCGGGACGGC GACCGGACGG
TTCGCCCTGC TCGCGGGCCG GTTGTGGCGC CCGCTGCAGC AGCACGAGGA ACGGGGCGCG
CTGTGA
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| Protein sequence | MGLHVHRAQR ADALAAALGD LLAEPPADPF GVDVVAVPTR GVERWLTQRL AHRLGTRDGR
SDGICAAVRF PSPTTLVDEL AGDRADDPWT PDAAVWPLLA AIEASVHEPW CALLAEHLGY
RGDDAQAEHR RGRRYAVARR IAGLFDGYAE HRPEMVAAWS QGGDDDGWGE PVPADLSWQP
RLWRRLRDRI DAPDPVATFA QVAARLAADP GAVDLPERVS LFGATALPHR QVLLLSALAH
HRDVHLWLPH PSPVLWDRVG ELRPPVPGRI RRRDDPTAGA ATHPLLASMG RDVRELRTVL
AGRIDRDTWH RADDPPATLL GRLQRDLSDN RRPGPGMADK PVVDATDDSV RVHAAHGPGR
QVDVLRDVVI GLLADDPTLH PADILIMCPD IEAFAPLLQG AFGLADSVPD GHPAHQLQVR
LADRALRQTN PLLATLDRLL DLAGSRVTAS DVLDFAAFAP VRHRFGFDDD ELSTLADWVA
AAGARWGLDA EHRRRYGLAE YGQNTWRAAL DRILLGVCMS DEPGNRLETA LPLDEIGSAD
VDLAGRLAEL IDRLATVVDT LSSRHSVQRW CAELLAGVQS LTSVPARAAW QVAEFRAEVA
AVQRHAAAAG STGLELGLAD VRALLAGALA GRPTRANFRT GTLTVCTMMP MRSVPHRVIC
LLGLDDGVFP RGAREDGDDL LIREPACGER DLRSQDRQLM LDAIVAATEK LVITYSGADE
RTGAQRPPAV PVGELLDALD DTATTATGGA VRDLVLVRHP LQPFDARTLT AGALGRVGPF
TFDPVALGGA RALAGPRRPA GRLVPAPLPA PDRPPADVEL AEVIEVLTHP AKGFLRRRLD
VAVPFEQDDP PDDLPVDLDA LQEWGVGDRI LRDRLAGVPE QECRQAEWRR GVLPPAALGG
RALERVLRDV RPLVDRTATL RAAPRHTVEV SVPLPDGRRL RGTVGGVHGI GLVTVSYSKL
APRARLQSWL AFLALTASDP ALAWTAAAVG RAERGRPQCA TLAALPGERA RELLIDLVGL
YEEGLRAPLP LPLKTGEKYA DARRRGMDHD KAQDQAAATW TGGKYPGERQ DAANMRVWGR
DAPFSVLTGS GTDPDTGIDT GTDPGIDADT GTDRGTATGR FALLAGRLWR PLQQHEERGA
L
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