| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_3906 |
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| Symbol | |
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| ID | 8449525 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | - |
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| Start bp | 4306472 |
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| End bp | 4308370 |
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| Gene Length | 1899 bp |
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| Protein Length | 632 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 645042952 |
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| Product | exodeoxyribonuclease V, alpha subunit |
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| Protein accession | YP_003203188 |
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| Protein GI | 258654032 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
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| TIGRFAM ID | [TIGR01447] exodeoxyribonuclease V, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.436608 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0788816 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACGT TCACCGAGTC CTTCGAGCGA CCGCAGGACC CCTACGATCG GCGGCTGGCC
CTGGGCGCCA GCGGACTGCT GCGGGCGGCC AACGTGGCCG ACGTCCTCAG CGCCGCCGAC
GTGCACGTGG CCACCCGGAT CGCGCAGCTG GCCGGCGAGC CCGACGACCG GGTGCGGCTG
GCCGTCGCGA TGGCGGTGCG CGGGATCCGC AGCGGCTCGG TCTGCATCGA CCTGGCGCAG
GCCCGGGCCA CGCTGCTGCT GGCCGATCCC GGCGGGGACT GGCCGGTCCT GCCGGACTGG
CGGGACGCGG TCCGGGCCAG CCTGCTGGTC GGCGCCGGCC GGCCGCTGCA GTGGGAGTTC
GACCTGCTCT ACCTGGACCG GTACCGGACG CAGGAGCAGC AGGTCCGCGA CGACCTGCGC
GACCGGCGGG CGCAGCCACC GCCGGTGGTG GACCGGGTCG CGCTGGCGGA CGGGTTGGAC
CGGCTGTTCG CCGGCGGTGA TCCGGGGCAG CGGCACGCCG CCGAGCTGGC CGCGACCGGC
TGGACCACGG TGATCGGCGG CGGGCCGGGC ACCGGCAAGA CCACCACCGT GGCCCGGGTG
CTGGCCCTGC TGATGGGGCA GCCGGGGGCG CGGCCGCGGG TCGCCATGGC CGCACCGACC
GGCAAGGCCG CCGCCCGGCT GCAGGCGGCG GTGCAGGCCC AGGCCGTGGC GCTGAGCCCG
GCCGACCGGC ACGACCTGCC GACCCTGACC GCCTCCACGC TGCACCGGCT GCTCGGTTGG
CTGCCCGGCC GCAGCCAGCG GTTCCGGCAC GACCGGGACA ACCGGCTGCC GTTCGACGTG
GTGGTGGTCG ACGAGACCTC GATGGTCTCG CTGACGATGA TGGCCCGGCT GCTCGAGGCC
GTGCGGCCGG ACGCCCGGCT CATCCTGGTC GGCGACCCGG ACCAGCTCGC CTCGGTGGAG
GCCGGCGCGG TGCTGGCCGA CCTGGTCGCC GGGCTGACCG CGGTCCCGGC CGCACCTCCG
GCCACAGGGT CGGCGACGGG GTCGGCCACA GAGTCGGCAG CGGGGTCGGC CGCAGGGCCG
GGCGCGGTCC CACCCGGCCC GCCGGCCATC GCGCCGGCCC GGGCCGACGC GGTGGCCCTG
CTGGACCGGA CCTGGCGCTT CGGCGGTGAC ATCGCCGAGC TGGCCGCCGC CGTCCGCGCC
GGTGACGCCG ACGCCGCGCT GGCCGTGCTG GCCCGCCCGG GCGCCGACGT GGCCCTGATC
GCGCCGGAGG ACACCGCCGG GGCGGGCGCG GCGGTGGACG CCGCCGTCCG ACCCGACGTC
GTCGGCACCG CCGCGGCCGT GCGGGCGGCC GCGGATGCCG GCGAGGCGCA GGAGGCGCTG
CGCCGGCTGG ACGGCCACCG GGTGCTGTGC GCCCACCGCA GCGGGCCGCG CGGGGTGACG
CAATGGACCT ATCGCATCGA GAATTGGCTG GCGGCCGAGG ATCTGCTGCC GCCGCATCGG
TTGTGGTACC CGGGCCGGCC GGTGCTGGTC ACCGCCAACG ACTACACGCT GCGGCTGTTC
AACGGCGATG TCGGGGTGGC CGTGCTGACC GGGGGCCAGC TGCGGGTCTC CTTCAGCCAG
CACGGCCGCA TCGTGGACTA CGCGCCGGGC CGGCTGGCCG ACGTGCAGAC CGTGCACGCG
ATGACCGTGC ACCGCAGCCA GGGCAGCCAG TTCGACCGGG TGACCGTCGT GCTGCCGGAG
GCGGATTCGC CGCTGTGCAC CCGAGAGTTG TTGTACACGG CGCTCACCCG GGCGCAGACC
CGGGTGCGGT TGATCGGCAC CGAGGCCGAG GTACGGGCCG CCGTCGCCCG TCCGGCCGCC
CGGGCCAGCG GGCTGCGGCT GCGGATGGCC GGCGGCTGA
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| Protein sequence | MSTFTESFER PQDPYDRRLA LGASGLLRAA NVADVLSAAD VHVATRIAQL AGEPDDRVRL
AVAMAVRGIR SGSVCIDLAQ ARATLLLADP GGDWPVLPDW RDAVRASLLV GAGRPLQWEF
DLLYLDRYRT QEQQVRDDLR DRRAQPPPVV DRVALADGLD RLFAGGDPGQ RHAAELAATG
WTTVIGGGPG TGKTTTVARV LALLMGQPGA RPRVAMAAPT GKAAARLQAA VQAQAVALSP
ADRHDLPTLT ASTLHRLLGW LPGRSQRFRH DRDNRLPFDV VVVDETSMVS LTMMARLLEA
VRPDARLILV GDPDQLASVE AGAVLADLVA GLTAVPAAPP ATGSATGSAT ESAAGSAAGP
GAVPPGPPAI APARADAVAL LDRTWRFGGD IAELAAAVRA GDADAALAVL ARPGADVALI
APEDTAGAGA AVDAAVRPDV VGTAAAVRAA ADAGEAQEAL RRLDGHRVLC AHRSGPRGVT
QWTYRIENWL AAEDLLPPHR LWYPGRPVLV TANDYTLRLF NGDVGVAVLT GGQLRVSFSQ
HGRIVDYAPG RLADVQTVHA MTVHRSQGSQ FDRVTVVLPE ADSPLCTREL LYTALTRAQT
RVRLIGTEAE VRAAVARPAA RASGLRLRMA GG
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