| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_3887 |
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| Symbol | |
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| ID | 8449506 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | + |
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| Start bp | 4287505 |
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| End bp | 4289505 |
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| Gene Length | 2001 bp |
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| Protein Length | 666 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 645042935 |
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| Product | transcriptional regulator, SARP family |
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| Protein accession | YP_003203171 |
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| Protein GI | 258654015 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3629] DNA-binding transcriptional activator of the SARP family |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.000943372 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.402378 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGGAA CCCGCTCGGA ATTGTTCGCG ATTATCGGCA ATGATCTCGA GAGCGGCCGT
TCCGGGTCCG GTCTCGAACC GACGCGCCGG GACGACAGCA ATCCGAGATC CGTCCTGCAA
TTCCGCATCC TCGGCCCCGT CCAGGTCTTC TGCCACGGCA GCGAGGTCCA GCTGGGGGGC
TCGAAGCAAC GCACGGTGCT GGCCACCCTG CTGCTGGCCC GGGGCCGGGT GGTCACCGAC
GCGGCCCTGA GCACGGTGTT GTGGGGTGAG GATCCGCCGC GGACCTCCAG CGCGCAGATC
TACACCTACG TCTCCCGGTT GCGCCGCAGT CTGGGCGAAC AGGTCGAGCT GGTGCGCAGC
GGCCAGGGCT ACGCGCTGCG GGCGCCGCAC GCCTGGTTCG ACCTCGACGA GTACCTCAGC
CTCACCCGGC TGGGTCGGGC GACCCTGGAA CAGGGACGGC CCGACGTCGC CACCTTGCAC
CTGGCCGCCG CGTTGGCCCT CTGGCGGGGC GCGGCCCTGG GATCGGGCAC CGAGTTCCTG
GCCGAGACCG AGGTCGCGGC GTTGGAGGAG AGCCGGCTGA GCACCCAGGA ACTGTGGGTC
GAGGCCGAAC TGTCGCTGGG CCGGTGCCGC GGCCTGATCG CCGAACTCAC CTCGCTGGTG
GCCGCCCATC CCCTGCGGGA ACGCTTCCGG GCCCAGCTGA TGACCGCCCT GTGGCGCTCG
CACCGGCGGG CCGACGCGCT GCGGACCTTC TTCGAGGGCC GGGAGCTGCT GGCCGACGAG
CTCGGCGTCG ACCCGAGCCC ACTGCTCACC GAGCTGTACG AGGAGATCGT CGCCGAACCG
GCGGACGGCC CGACGGTGCC TGGCGCGTCC GCCGACGGCC CGACCGGTCC CGTCGGCCCC
CGAGCGCCGG CGCCGGCGCC GGCGCCGGCC ATGCTGCCGC CCGATCTGGC CGACTTCACC
GGGCGGCGCA CCGAGGCGGC CCGGCTCAGC AGCTGGCTGG GATTCCAGCA CCCGGCGACC
CCGCCCCGGC CGCACACCCC GGCCCCGTGC GCGGTGGCCT GCGACGGGCG CCCGCGGATG
GCGCTGATCT CCGGTCCCCC GGGTGTCGGC CGGTCGTCGC TGGCCATCCA CGTCGCCCAG
TTGGGCCGCC AGCTGTATCC CGACGGGCAG CTGTTCGTCG ATCTGGGCGG GCCCGGCCGG
CCGCGGGTGG ACGTGCGCGA CGTGCTGGCC TGGTTCCTGC GGGCCCTGGG CGCCACCGCC
GATCAGATTC CCGGCGACAC CCAGGAACGC GCGCAGGTGT ACCGGAGCAT GCTGGCGCGC
CGGCGGGTGC TGGTGGTGCT GGACAACGCC GTCTCCGACG AACAGGTCCA CCTGCTCCTG
CCGGCCGGCG CGGGCTGCGG AGTGCTGATC ACCAGCACCG AACCACTGGC CGCGGTACCG
CTGAACCGGC AGATCGATCT CGGTCCGTTC GGCATGGACG AGGCGCTGGC GTTCCTGGGC
CGCGCGGGCG GCCAGGACCG GGTACGAGTG GAGCGGCCGG CGGCGGTGGA GCTGGTCAAC
AGCTGCGGCC GGTTCCCCCT GGCCCTGCGG ATCCTGAGCC TGCAGTTGAG CCGCAAGCCG
CACTGGTCGC TGCGGCAGAT GGTCACGCAC CTGCACGCCG ACGCAACCCG GCTGGACCGG
CTGCAGGCCG GGGCGCTGCA CATCCGACCG GCCCTGGACC GGTTGTTCGA CGCGATCGAG
GAGGGCCGGC TCACCCAGAT CCGGCTGCTG GCCGACCTGC CAACCCCGAC CTTCACCGCG
GACACGGTCG GCCGGTTCCT GGGGATGCCC GAGAGCCTGG CCGAGCACGT CTTGGAACAG
CTGCTCGACC GGCGGCTGCT GGAGGTCATC GGGCTCGATG CCGGCCGCCG CCCGCTCTAC
ACCTTCCCGC CGCTGACCCG GTTGGCCGCC CGCGAGCTGC GGCGCGGGGC CGGAACCCGG
CCGGTGGTCG AGGGCGCCTG A
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| Protein sequence | MTGTRSELFA IIGNDLESGR SGSGLEPTRR DDSNPRSVLQ FRILGPVQVF CHGSEVQLGG
SKQRTVLATL LLARGRVVTD AALSTVLWGE DPPRTSSAQI YTYVSRLRRS LGEQVELVRS
GQGYALRAPH AWFDLDEYLS LTRLGRATLE QGRPDVATLH LAAALALWRG AALGSGTEFL
AETEVAALEE SRLSTQELWV EAELSLGRCR GLIAELTSLV AAHPLRERFR AQLMTALWRS
HRRADALRTF FEGRELLADE LGVDPSPLLT ELYEEIVAEP ADGPTVPGAS ADGPTGPVGP
RAPAPAPAPA MLPPDLADFT GRRTEAARLS SWLGFQHPAT PPRPHTPAPC AVACDGRPRM
ALISGPPGVG RSSLAIHVAQ LGRQLYPDGQ LFVDLGGPGR PRVDVRDVLA WFLRALGATA
DQIPGDTQER AQVYRSMLAR RRVLVVLDNA VSDEQVHLLL PAGAGCGVLI TSTEPLAAVP
LNRQIDLGPF GMDEALAFLG RAGGQDRVRV ERPAAVELVN SCGRFPLALR ILSLQLSRKP
HWSLRQMVTH LHADATRLDR LQAGALHIRP ALDRLFDAIE EGRLTQIRLL ADLPTPTFTA
DTVGRFLGMP ESLAEHVLEQ LLDRRLLEVI GLDAGRRPLY TFPPLTRLAA RELRRGAGTR
PVVEGA
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