| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_3876 |
|---|
| Symbol | |
|---|
| ID | 8449495 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | - |
|---|
| Start bp | 4269142 |
|---|
| End bp | 4270149 |
|---|
| Gene Length | 1008 bp |
|---|
| Protein Length | 335 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 645042924 |
|---|
| Product | ornithine cyclodeaminase/mu-crystallin |
|---|
| Protein accession | YP_003203160 |
|---|
| Protein GI | 258654004 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2423] Predicted ornithine cyclodeaminase, mu-crystallin homolog |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.0804038 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.0484159 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCTGATCC TGCGTGCCCA CGACGTCGCC GACGCCCTGG CCGGCCGCGA ACTCGACGTC
ATCGACGTCA TCGAGCAGAC CTACCGCGCG CACGCCACCG GCCGGACCGC GGTGCCGCAC
TCGGTGTTCC TGCGCTTTCC CGATCAGCCG CGGGAGCGGA TCATCGCCCT CCCGGCGTTC
GTCGGCGGGC CGCACGCCGC CGCCGGGGTC AAGTGGGTCT CCTCCTTCCC CGGCAACGTG
GTAGCCGGAA CACCGCGGGC CAGTGCGGTT CTCGTGTTGA ACTCGCTGCT GGACGGCCGG
CCGCAGGCAT TGCTGGAGGC CTCACAGCTC TCGGCCGCCC GGACCGGCGC CGGTGCCGCG
CTGGCCGCGC GAACCCTGGC GGCCGGACGG CCGCTGCGGG GCGCCGGCCT CGTCGGCACC
GGCGTCATCA ACGTCGAGGT GCTCCGGTAT CTGGTCGCGG TCGCCCCGGA GCTGACCTGC
GTCACCGTTT TCGACCGAGA CCCGCAGCGG GCCGCCGCCT TCGCGGCGCA GGCGCGGGAG
CTGGTGCCGA CGGTCGAGAT CGCTGACCAC GTCGACCAGG CACTGGCCCG GCACGACCTG
ATCAGCCTGG CCACCACCGC CGCCGAACCG CACCTCGACC TGGGCGCCTG CCGGCCGGGT
GCACTGGTGC TGCACATCTC GCTGCGGGAC ATTGCCGTGG CGACCATCCG CAACGCCTAC
AACGTGGTCG ACGACGCCGA CCACGTCTGC CGCGAGCGCA CCTCGCTGCA CCTGGCCCAG
CTGCAGACCG GTGACCGATC GTTCATCGGG GCCGGCCTGG GCGACCTGCT GACCGGCGCG
ACGCCGCTGC CGGCCGCCGA CGGCCGGCTG GTGATCTTCT CACCCTTCGG CCTGGGGGCG
CTGGACATCG CGCTCGCCCA CTACGTCCGG AGCCGGGCGC AGGCCAACGG GGCCGGCGTC
GAGGTCCCGG ATTTCCTGCC GAGCCAACCG GTCTCGGCCA CCCACTGA
|
|---|
| Protein sequence | MLILRAHDVA DALAGRELDV IDVIEQTYRA HATGRTAVPH SVFLRFPDQP RERIIALPAF
VGGPHAAAGV KWVSSFPGNV VAGTPRASAV LVLNSLLDGR PQALLEASQL SAARTGAGAA
LAARTLAAGR PLRGAGLVGT GVINVEVLRY LVAVAPELTC VTVFDRDPQR AAAFAAQARE
LVPTVEIADH VDQALARHDL ISLATTAAEP HLDLGACRPG ALVLHISLRD IAVATIRNAY
NVVDDADHVC RERTSLHLAQ LQTGDRSFIG AGLGDLLTGA TPLPAADGRL VIFSPFGLGA
LDIALAHYVR SRAQANGAGV EVPDFLPSQP VSATH
|
|---|
| |