Gene Namu_3845 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_3845 
Symbol 
ID8449464 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp4216151 
End bp4216825 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content73% 
IMG OID645042894 
ProductNUDIX hydrolase 
Protein accessionYP_003203130 
Protein GI258653974 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.00494559 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.589145 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGCCGG CTGTGCCTTC CTCCGAGCGG CTGTCCGACT ATCCGCGTCC CAGTGTGGCG 
GTGGACGTGG CCGTGCTGAC CGTGCGGGAC GACCGGCTGC ACGTGGTGGT GGTCGACCAC
CGGCTCGGGG GCCTCGCCCT GCCCGGAACC TTCCTGCACG AGGGGGAGGT GCTGGCCGAT
GCCGCCGCCC GCGCGCTGAC CGACAAGGCC GGGCTGCACC GGGTGCCGTT CGCCCAGCTG
CACGTGTTCG ACCGTCTCGA TCGGGACGAT CGCGGGTGGG TGCTGTCGAT CGGGCACTGC
GCCGTCGTCC CCGCCGACCG GATCGGGCCG GACACCCGGC TGCTGGCGAT CCGGGCCGGC
CGGGCCGCCG GCGAGCTGCT GTTCGACCAC GACGAGATCG TCCGGCTGGC CGTCGATCAG
CTGCGCCGCG AGTACGCGAC CGAGGTGGAC CCGGGCGGCC TGCTCGGACC CGAGTTCACC
GTGCGCCAGC TGCGCAAGGT CTACGAGGCG GTGTTCGAGC GGGCGCTGAT GAAGGACACG
TTCCGCCGGC TGGTGGTGCC GAACCTGGAT CCCACCGGCG AGTACGGCAG CGACTTCGGG
CGTCCGGCCG AGATCTACCG GCGCGGTCCC CGCACCCGGC TGACCCCGAA GGCGTGGGCC
ACCCTGACCG GCTGA
 
Protein sequence
MVPAVPSSER LSDYPRPSVA VDVAVLTVRD DRLHVVVVDH RLGGLALPGT FLHEGEVLAD 
AAARALTDKA GLHRVPFAQL HVFDRLDRDD RGWVLSIGHC AVVPADRIGP DTRLLAIRAG
RAAGELLFDH DEIVRLAVDQ LRREYATEVD PGGLLGPEFT VRQLRKVYEA VFERALMKDT
FRRLVVPNLD PTGEYGSDFG RPAEIYRRGP RTRLTPKAWA TLTG