| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_3822 |
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| Symbol | |
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| ID | 8449441 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | + |
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| Start bp | 4196707 |
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| End bp | 4197900 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 645042872 |
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| Product | putative RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003203108 |
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| Protein GI | 258653952 |
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| COG category | [K] Transcription |
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| COG ID | [COG4941] Predicted RNA polymerase sigma factor containing a TPR repeat domain |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.134203 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0773892 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCCTA CCGAACCGCC GGCGCCGTCG TGGGACGGGG ACGCCCTGCG CGCCCTCGTC
CCGCGGGTGC TGGCCGGCCT GGTCCGGCGG GGTGAGGATT TCGACGCCGC CGAGGACGCG
CTGCAGGAGG CGCTGCTGGA GGCGATCCGG GTCTGGCCCG GGCACCCCCC ACGGGATGCC
CGGGCCTGGT TGACGGCCGT CGCGACCCGG CGGCTCATCG ACGCCCGGCG CAGCGCCGCC
GCCCGCGCTC GCCGCGAGGT GACCGATCAG GTCCAGCCGG TGCCGGGCGC GACCGAGAAC
GGCGATGACA CGCTGCTGCT GCTGTTCTGC TGCTGCCATC CCGAACTCGC CCCCGCGTCC
CAGATGGCGC TGGCCCTGCG GGCCGTCGGC GGTCTGACCA CCCGGGAGAT CGCCGACGCC
TTCTACGTCC CGGAAGCGAC GATGGCGCAA CGGATCAGCC GGGCCAAGCG CACCCTGCGC
GGGCGCCGGC TCGACCGGCC CGGCGACCTG GCCGTCGTGC TGCGGGTGCT GTACCTGATC
TATTCGACGG GTCACCACGA GCGGGTGGAC CTGGCCGGGG AGGCGATCCG GCTCACCCGC
CAGCTCACCC TGGGCACCGA CGAGCCCGAG GCGCACGGCC TGCTGGCGCT GATGCTGCTC
AACCACGCCC GGTCGGCGGC CCGCGTGGAC GCGGACGGGC GGATCGTCAC CCTCGATCGG
CAGGATCGCG GCCGGTGGGA CACCCGGCAG ATCGCCGAGG GCGTGCGGGT CCTGCAATCG
GCGTTGGCCG CGCAGCGACC CGGCCGCTAC CAGATCGAGG CGGCGATCGC CGCCCTGCAC
GACGACGCCG TCGATGCCGC GGAGACCGAC TGGCCGCAGA TCCTTGCCTG GTACGACGAT
CTGGTCGCCC TCACCGACGA TCCACGGCGT CAGGATCCGG CCGCCGTGCT GGGGCGGGCG
GTTGCCGTCG GCCACGTGCT GGGCGCGTCC GCCGGGCTGC GCGAGACCGA ACGGCTGCGC
GAGGTCATCG GCGAGCGGCA TCGCTGGCAC GCGGTCCGCG GCTATCTCTA CGAACTCGGT
GGGCAGGGTC CGGCCGCTGC CGCGGCGTAC GCCGAGGCGG CCCGGCGAGC CGGCACCGTC
GCCGAACGCG ACCACCTGAT CCGGCAGGCG GCTCGCATCC GGGCCGCCGG CTAG
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| Protein sequence | MNPTEPPAPS WDGDALRALV PRVLAGLVRR GEDFDAAEDA LQEALLEAIR VWPGHPPRDA
RAWLTAVATR RLIDARRSAA ARARREVTDQ VQPVPGATEN GDDTLLLLFC CCHPELAPAS
QMALALRAVG GLTTREIADA FYVPEATMAQ RISRAKRTLR GRRLDRPGDL AVVLRVLYLI
YSTGHHERVD LAGEAIRLTR QLTLGTDEPE AHGLLALMLL NHARSAARVD ADGRIVTLDR
QDRGRWDTRQ IAEGVRVLQS ALAAQRPGRY QIEAAIAALH DDAVDAAETD WPQILAWYDD
LVALTDDPRR QDPAAVLGRA VAVGHVLGAS AGLRETERLR EVIGERHRWH AVRGYLYELG
GQGPAAAAAY AEAARRAGTV AERDHLIRQA ARIRAAG
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