| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_3812 |
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| Symbol | |
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| ID | 8449431 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | + |
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| Start bp | 4183901 |
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| End bp | 4186684 |
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| Gene Length | 2784 bp |
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| Protein Length | 927 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 645042862 |
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| Product | transcriptional regulator, LuxR family |
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| Protein accession | YP_003203098 |
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| Protein GI | 258653942 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3899] Predicted ATPase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.142204 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0901624 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGATC ATTTCGTCGG CCGGGACACC GAGCTGGACA CGCTCGACGA GCTTCTGGTC
CAGGCCCGCG CCGGAGCCCC GCACGTCGTC CTGCTGGTCG GTGAGCCCGG GATCGGCAAG
ACCACGCTGA TCGACGGGTT CCTGCGCCGG CATCGTGACG TCACGTCCCT GCGCGCGGGC
GGGGACGACA GCGAAATGCT CTACTCCTAC GGAATCGTCC GGCAGCTCGC GGCGTCGGCC
GGGCCGGCCG GCCTCGAGCT GGCCGGCCAG CTGGCCCAGG TCGCTCCGGT GCCCGACCCG
ATCGCCATCG GCAGCCAGCT GCTGGCCCTG CTCGGCGAGC GGCAACAGGC CGGGCCGGCC
GTCCTGGTCA TCGACGACAT CCAGTGGGCC GACGACCCTT CGGTCAAGTC GATCACCTTC
GGGTTGCGCC GGCTTCAGGC CGACCAACTG CTGGTGATCC TCGCGGTTCG CGAGGAGTCG
ATCAACGAGC TGCCGGACGG GCTGCTGCGC ATCGTCCGCG GCGAGCTGGC CACGGAGATC
CGGTTGGGGG GGCTGGCCGA GCACGAACTG GCCGAGCTGG CCGGAAAGCT CGGCATCGGC
AGCTTCCCGG CTCGGGCGGC CAGGCGGCTG CGATCGGGCA CGGACGGGCA TCCGTTGTTC
GCCCGCGAGC TGCTCCGGGA GTTCCCGCCC GAATCCTGGG GAGCACAGGA CGTCCTGCCG
CCGCCCCGGT CGTTCCGGCA CCTGGTCCGG CAACGTTACC GGCGGTGCAG CACCGACGGG
CGCCGGCTGG TGGACGCGGC GGCCGTCATC GGCCTGTCCG CCCCGCTGGC CCTGACCGCC
CAGTTGGCCG ACCTCCCGCA CGCGCTGGAA GCGATCTCCG ATGCCGAGCG GGCCGACCTG
CTGCAGCTGG TCGACGCCTC GTATCCCGGA TCGGTCCGCT TTCCCCATCC GCTGGTTCGG
TCGGCCGTGT ACTCGGCGAT CGACCCCCCG CACCGCTCCG CGCTGCACGC TCGCGCGGCC
CAACTGCTGG ACGACACCAG AACGGTGCTG CAGCACCGGT TCGCGGCGGC CCGGCAACCG
GACGAGGGGC TGGCCGCCGA CCTGTCCGCG TTCGCCGCCA CCGAGATTCA CAACGGCGAG
TGGGTCAGTG CCGCCACGCA CTTGGTCCGC AGTAGCCGGC TCAGCCCGCA GCCGGCGGAT
CGGCAACGCC GGCTCCTGCG GGCGGTCAAT TTTCTGGTCA TCGCCGGCGC GGCGTCCCAG
GCCGCGCACC TGGCCGAGGA GGTCGCCTCC TTTCCGCCCG GCCCGTTGCG GGACAGCACC
CTGGGGTACC TGGCGACGGC CACCCGGGGG CCCGCCGAGG CGGGGCGGCT GCTCAGCAGT
GCCTGGCAGC AGGTCGATCC GGCCGCCGAC CGGGAGTTGG CGGCCACCAT CGCGCTGCAG
AGCGCGATCC ATTTCCACGG CCGGCTGGAC GGCCCGGCCA CCGCCACCTG GAGCGCCAAG
GCCATCGACC TCACCGAACC CGACGACCCG ATGCGGTTCG TGGCCGAGAC GCATCGAGCC
TTCGGCCTTG GCTACTCCGG TCGATTCGGC GAGGCGCTGC CCGTGGTCGA AGACGTGACC
GGCACGATCG ACGGCAGTCC GGACGCCCGC CGGGTCCAGC ACGGAGCCGC GCACGGCTGG
CTCCGGTTAA TCAACGACGA TCTCGTCACG GCCCGCAGCA TGTTGCACGC GGTTGCGGTC
GACGCCGCCC GACTGGTCAC GCTGAACACC GCGGCGTTCA GTTACGCCCA CCTCGCGCGG
GCCGAGTACC TCGCCGGGGC CTGGCACGAG GCCCTGGTCC ACATCGAGAA CGCCATCGCG
CTGACCACCG AATCGGAGTC GGACTACCTG CGCTCGTTGG TGTTCGGGAT GGCCGTCGTC
ATTCCGGCCG CGCGGGGCGA GTGGGCGGCC GCCCGCACCT ACGCCGATCT CGCGACCGCC
GAGGCCAGCT CCTACGAGCG GGCAGTGGCC GCGGCCGCCC TGGCCGGGGC ACAGCTGGCC
GCCGCCCGGG ACGAGCCCGA GCGGGTCCTG GACCTGCTCG ACCCCATCCG CGCGATGCAC
CCCCGTCAGG GCATCGACGA GCCGGGGATC TGGCCCTGGC CCGAGCTCTA CGCCGACGCC
CTGACTGCCC TGGGTCGCAC CGCCGAGGCG GACGCGTTCC TGATCCCCCA TGAGCTGCTG
GCCCACCGCC GCCGGCGCGC CTCCGCGATT GCCCGACTCG CCCGGGCGCG CGGTTCGCTG
GAGTCCCGGG CGGGCCGGGA CAGCGTGGCG GACCAGGCAT TCCAGCTGGC CGCCGGGCAG
ATCCAGCGGT TGGCCATGCC TTACGAGCAG GCTCTGATCG AGCTCGCCCA TGGCCGGCAC
CTGGTCCGGA CCAACCGGCG TAAGGCCGCC GCCAAGCTGC TCACCGCCGC CGGCGACCGG
TTCACCGCTT TGGGTGCGGC CCCGTTCCTG GCCCAGACTG TCGCCGAGCT GCGCGCCTGC
GGCATCACCG TCGAAGGCAC CACCCGGCAA CGCCTGCGCA TCGGCCTGAC CTCCCAGGAA
CTGGTGGTCG CTCGCCTCAT CGCCGATGGC AAGACCAACC GTGAGGCCGC CGCGGATCTC
GTCGTCAGTG TGAAGACCAT CGAGTACCAC CTGAGCAACG TCTACGCCAA GCTGGGCGGC
ATCACCCGGC GGCAGCTCCG CAGCGCCCTG GCCGACCACG ACCAGCAGGC TCCTCTGCAG
CACCGCCGAA CCGCGTCATC GTGA
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| Protein sequence | MSDHFVGRDT ELDTLDELLV QARAGAPHVV LLVGEPGIGK TTLIDGFLRR HRDVTSLRAG
GDDSEMLYSY GIVRQLAASA GPAGLELAGQ LAQVAPVPDP IAIGSQLLAL LGERQQAGPA
VLVIDDIQWA DDPSVKSITF GLRRLQADQL LVILAVREES INELPDGLLR IVRGELATEI
RLGGLAEHEL AELAGKLGIG SFPARAARRL RSGTDGHPLF ARELLREFPP ESWGAQDVLP
PPRSFRHLVR QRYRRCSTDG RRLVDAAAVI GLSAPLALTA QLADLPHALE AISDAERADL
LQLVDASYPG SVRFPHPLVR SAVYSAIDPP HRSALHARAA QLLDDTRTVL QHRFAAARQP
DEGLAADLSA FAATEIHNGE WVSAATHLVR SSRLSPQPAD RQRRLLRAVN FLVIAGAASQ
AAHLAEEVAS FPPGPLRDST LGYLATATRG PAEAGRLLSS AWQQVDPAAD RELAATIALQ
SAIHFHGRLD GPATATWSAK AIDLTEPDDP MRFVAETHRA FGLGYSGRFG EALPVVEDVT
GTIDGSPDAR RVQHGAAHGW LRLINDDLVT ARSMLHAVAV DAARLVTLNT AAFSYAHLAR
AEYLAGAWHE ALVHIENAIA LTTESESDYL RSLVFGMAVV IPAARGEWAA ARTYADLATA
EASSYERAVA AAALAGAQLA AARDEPERVL DLLDPIRAMH PRQGIDEPGI WPWPELYADA
LTALGRTAEA DAFLIPHELL AHRRRRASAI ARLARARGSL ESRAGRDSVA DQAFQLAAGQ
IQRLAMPYEQ ALIELAHGRH LVRTNRRKAA AKLLTAAGDR FTALGAAPFL AQTVAELRAC
GITVEGTTRQ RLRIGLTSQE LVVARLIADG KTNREAAADL VVSVKTIEYH LSNVYAKLGG
ITRRQLRSAL ADHDQQAPLQ HRRTASS
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