Gene Namu_3804 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_3804 
Symbol 
ID8449423 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp4176486 
End bp4177856 
Gene Length1371 bp 
Protein Length456 aa 
Translation table11 
GC content71% 
IMG OID645042855 
ProductCyclopropane-fatty-acyl-phospholipid synthase 
Protein accessionYP_003203091 
Protein GI258653935 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2230] Cyclopropane fatty acid synthase and related methyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.119292 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.179835 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACCT TCCGGTCCCC TGGCCTCCGG TCCTCGATCA CCTCCCACGA TCTGAACCCC 
GACCTGAACC CCGGCCCATC GACGTCGCCG CCGACCCGTC ATGGGTCGAT GACGGTCGCG
CAGATCGCCT CGACCATCAC CGACGGTCCG CTGCCGTTCC GGCTGACTGC CTTCGACGGC
AGCCAGGCCG GTCCGCCGGA CGTTCCCGGA CTGCACATCG GCAACCGGCG CGCCCTGAAC
TACCTGCTCA CGGCGCCCGG TGACCTGGGT CTGGCCCGCG CGTACGTGGC CGGCGACATG
GACATGACCG GGGTGCACCC GGCCGACCCG TACGAGTTGC TCCGGTTGAT GGACGACGAA
CTGCGGCTGC GCCGGCCCTC GGCCGGCGAG ATCGTCGAGC TGGTGCGCGG AGTCGGGCTC
AAGACGCTGC TGCCGGTCGC CCCGCCGCCG CAGGAGGCGA CGCCGCGATG GCTGCGGGTC
ACGCAGGGCC TGGGCCACAC CCGCCGGCGC GACTCCTCGG CCATCGGCCG GCATTACGAC
GTGTCCAACG AGTTCTACGA GTCGGTGCTC GGACCGTCGA TGACCTACAC CTGCGCGCTG
TATCCGACCG CCGACACCAC CCTGGAACAG GCCCAGGAGG CCAAGCACGC GCTGGTGTTC
GACAAGCTCG GGCTGGAGCC GGGCGACCGG CTGCTGGACG TCGGCTGCGG GTGGGGGTCG
ATGGTGCGCT ACGCCGCCCG GCGCGGGGTG CGGGCCCTCG GAGTGACGCT GTCCCGCCAG
CAGGCCGACT GGGGCCGGCG GGCGGTGCAG GAGGAGGGGC TCGGCGACCT GGCCGAGATC
CGTTACCTGG ACTACCGGGA CGTCCCCGAG ACCGGCTTCG ACGCCGTGTC CTCCATCGGC
TTGACCGAAC ACATCGGGGT GCGCCGCTAC CCGGACTACT TCGCGCGATT GCACGACAAA
CTGCGGCCCG GCGGGCGGCT GCTCAACCAC TGCATCACCC GCCCGCGCAA CGACACCGCC
GTCAAGCCCG AGCCGTTCAT CGACCGGTAC GTCTTCCCGG ACGGCGAGCT CACCGGGTCC
GGGCGGGTCA TCGTGGCCAT GCAGGACGCC GGCTTCGATG TCCGGCACGC CGAGAACCTG
CGCGAGCACT ACGCCATGAC GCTGCGGGAC TGGTGCGCGA ACCTGCACCG GGACTGGGAC
AGCTGCGTGG CCGACGTGGG CGAGGGCACG GCCCGGGTCT GGGGCCTGTA CATGGCTGCC
TGCCGGTTGA GCTTCGAGCG CAACAACATC CAGCTGTTCC AGGTGCTCGG GGTCAAGCCG
ACCGACAAGG GCGATTCGCG GGTGCCGCTA CGCCCCTGGT GGCACGGCTG A
 
Protein sequence
MTTFRSPGLR SSITSHDLNP DLNPGPSTSP PTRHGSMTVA QIASTITDGP LPFRLTAFDG 
SQAGPPDVPG LHIGNRRALN YLLTAPGDLG LARAYVAGDM DMTGVHPADP YELLRLMDDE
LRLRRPSAGE IVELVRGVGL KTLLPVAPPP QEATPRWLRV TQGLGHTRRR DSSAIGRHYD
VSNEFYESVL GPSMTYTCAL YPTADTTLEQ AQEAKHALVF DKLGLEPGDR LLDVGCGWGS
MVRYAARRGV RALGVTLSRQ QADWGRRAVQ EEGLGDLAEI RYLDYRDVPE TGFDAVSSIG
LTEHIGVRRY PDYFARLHDK LRPGGRLLNH CITRPRNDTA VKPEPFIDRY VFPDGELTGS
GRVIVAMQDA GFDVRHAENL REHYAMTLRD WCANLHRDWD SCVADVGEGT ARVWGLYMAA
CRLSFERNNI QLFQVLGVKP TDKGDSRVPL RPWWHG