Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_3793 |
Symbol | |
ID | 8449412 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 4161977 |
End bp | 4165180 |
Gene Length | 3204 bp |
Protein Length | 1067 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 645042844 |
Product | isoleucyl-tRNA synthetase |
Protein accession | YP_003203080 |
Protein GI | 258653924 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0060] Isoleucyl-tRNA synthetase |
TIGRFAM ID | [TIGR00392] isoleucyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.578218 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGAGCA CCGCCGACCA CCCGAACGCC TACCCCCGCG CCGGCGCGAC CGAGGTCGCC ACCCACCCCG ACTTTCCCGC CCTGGAGCGG CAGGTCCTGG CCCACTGGGC CGCGGACGGC ACCTTCCAGG CCTCGATCGA CCGTCGCGCC GCCGGCGACA ACGGCAGCAA CGAGTACGTC TTCTACGACG GCCCGCCGTT CGCCAACGGC CTGCCGCACT ACGGGCACCT GCTCACCGGC TACGTCAAGG ACGTGGTGCC GCGCTACCAC ACCATGCGCG GTCGCAAGGT GGAACGCCGC TTCGGCTGGG ACACCCACGG TCTGCCGGCC GAGGTGGAGG CCGAACGCCA GCTGGGCATC AAGCACAAGT CCGAGATCGT CGGGATGGGC ATCGAGGCGT TCAACGACGC CTGCCGCCAG TCGGTGCTGC GGTACACCCA CGAATGGCAG GAGTACGTCA CCCGGCAGGC CCGCTGGGTC GACTTCGAGA ACGACTACAA GACCCTTGAC CTGGACTACA TGGAGTCCGT CATGTGGGCC TTCAAGACGC TGTGGGACAA GGGCCTGATC TACGAGGGCT ATCGGGTGCT CTGGTACTGC ATCCGCTGCG AGACGCCGCT GTCGGCCACC GAGACCAAGA TGGACGACAC CTACCGGTCC CGGCAGGACC CGGCGGTCAC CGTCTCGCTG CGCCTGCGCT CGGACGACCC GGCCCTGGAC GGGGTCAACG CGCTGGTCTG GACGACCACC CCGTGGACCC TGCCGTCCAA CCTGGCCGCC GCGGTCGGGC CGGACATCGA CTACGTCGTC GTCGAGTCGG CCGGCCCGTT CGCCGGGCGG TACCTGCTCG CGCAGGCGCG GCTGGGGGCC TACGCCCGGG AGCTGGGGGA GGAGCCGGCC GTGCTGGCCC GCTACACCGG GGCCCAGCTG GTCGGGGTGC GCTATACGCC GCCCTTTGAC TTCTTCGTCG GCCGGGACAA CGCGCACCAG GTGCTGACCG CCGACTACGT CAGCACCGAG GACGGCACCG GCATGGTGCA CATCGCGCCG GCCTTCGGTG AGGAGGACAA GGCCGTCACC GACGCCGCCG GCATCGAGGT GGTCAACCCG GTCGACGGGC AGGGCCGGTT CACCGCGCAG GTGCCCGCCT ACGAGGGCTT TCAGGTCTTC GACGCCAACG TGCCGATCAT CGCCGACCTC AAGGCGGCCG GGCTGCTGCT GCGCCGCGAC TCCTACGAGC ACCCGTACCC GCACTGCTGG CGCTGCGACA CCCCACTGAT CCAGCGGGCG GTCTCGTCCT GGTTCGTGGC CGTCACCCAG TTCCGGGACC GGATGGTCGA GCTGAACCAG CAGATCAGCT GGGTGCCCGG GCACATCAAG GACGGCCAGT TCGGCAAGTG GCTGGAGGGG GCCCGGGACT GGTCGATCTC CCGCAACCGA TTCTGGGGCT CGCCGATCCC GGTCTGGACC TCGGACGATC CGACCTACCC GCGGACCGAT GTGTACGGCT CGCTGGACGA GCTGGAGCGC GACTTCGGGG TGCGGCCGAG CGACCTGCAC CGGCCGATGG TCGACGAGCT GACCCGGCCC AACCCGGACG ACCCGACCGG GCGCTCGACC ATGCGCCGGG TACCCGAGGT GCTGGACTGC TGGTTCGAGT CCGGCTCGAT GCCCTACGCC CAGGTGCACT ACCCGTTCGA GAACCGCGAG TGGTTCGAGG ACCACTACCC GGGCGACTTC ATCGTCGAGT ACAACGGGCA GACCCGCGGC TGGTTCTACA CCCTGCACGT GCTGGCCACC GCGCTGTTCG ACCGGCCGGC GTTCGTCACC TGCATGGCCC ACGGCATCGT GCTGGGCGAC GACGGGCAGA AGATGAGCAA GTCCCGGCGG AACTACCCGG ACGTGGGGCA GGTGTTCGAG CGGGACGGCT CGGACGCGAT GCGCTGGTTC CTGATGTCCT CGCCGATCCT GCGCGGCGCC GACCTGGTCG TCACTGAGCA GGGCATCCGG GACAGCGTCC GCCAGGCCGT GCTGCCGCTG TGGAACGCCT GGTCGTTCCT GTCCCTGTAC GCCAATGCGG GGGGAGTTGC CGGGTCGATC CGGACCGACT CGACCGACGT GCTGGACCGC TACATCCTGG CCAAGACGGC GGAGCTGACC GGTGAGGTCA CCGCGGCGAT GGACGCCTAT GACCTGGCCG GCGCCTGCGC CGCGGTCCGG GTCTACCTGG AGGTCCTGAC CAACTGGTAC ATCCGGCGGT CCCGGCAGCG CTTCTGGGAC GCCGACCAGG ACGCGATCGA CACCCTGCAC ACGGTGCTGG AGACCCTGTG CCGGGTGGCC GCGCCGCTGC TGCCGCTGAC CACCGAGGTG ATCTACCGGG GGCTTACCGG CGAACGGTCC GTGCACCTGA CCGACTGGCC GGCCGACCAG TTGCCGCTGG ATGCCGAGCT GGTGACGGTG ATGGACGAGG TCCGCGAGGT CGCCTCGGTC GCCCTGTCGG TGCGCAAGGC CGGCAAGCTC CGGGTCCGCC AACCGCTGTC GTCGATGACC GTCGCGGTGC GGGACGCGGC CGCGCTGGAG CCATTCGCGG CGCTGCTGGC CGACGAGGTC AACGTGCGCT CGGTGCTGGT CAGCGAGCTG GCCGAGCACG ACGAGCGGGT CACCCGCCGG CTCACGGTGA ACGCCCGGGC CGCCGGTCCC CGGTTGGGCA AGCAGGTCCA GCAGGTGATC AAGGCGGCCA AGTCCGGCGA CTGGTCGGTG GCCGAAGACG GCACCGTGAC CTGCGGTGAC GTGGTGCTGG CGGACGGGGA GTACACCCTG GAACTGTCCG CCGCCGGCGC GTCCTCCGAC GCGGTCGGCC TGCTGTCCGC CGGCGGGTTC GTCGCGCTGG AGACCACGCT GGACGACGAC CTGGTCGCCG ACGGCCTGGT TCGCGACGTC GCCCGGGGCG TGCAGGACCT GCGCAAGAGC GCCGGCCTGG ACGTCTCGGA CCGGATCGAG CTGTTCGTGG TGAGCGACGA CGCCATCGCG CGGTCGGCCG TACTCGGGCG GTGGGGGTGG CTCGCCGATC AGGTGCTCGC GGTCAACGCG GCCACGCTCG AGCCGGCTCC GGCCGACGCG CTCGGTGCCG CCGACCTGGT CGCCGGTACC GGCGTCGACG CCGCCATCCG GGTGCAGCTG CGCAAGGCCC CCAGCGGGTC CTAG
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Protein sequence | MASTADHPNA YPRAGATEVA THPDFPALER QVLAHWAADG TFQASIDRRA AGDNGSNEYV FYDGPPFANG LPHYGHLLTG YVKDVVPRYH TMRGRKVERR FGWDTHGLPA EVEAERQLGI KHKSEIVGMG IEAFNDACRQ SVLRYTHEWQ EYVTRQARWV DFENDYKTLD LDYMESVMWA FKTLWDKGLI YEGYRVLWYC IRCETPLSAT ETKMDDTYRS RQDPAVTVSL RLRSDDPALD GVNALVWTTT PWTLPSNLAA AVGPDIDYVV VESAGPFAGR YLLAQARLGA YARELGEEPA VLARYTGAQL VGVRYTPPFD FFVGRDNAHQ VLTADYVSTE DGTGMVHIAP AFGEEDKAVT DAAGIEVVNP VDGQGRFTAQ VPAYEGFQVF DANVPIIADL KAAGLLLRRD SYEHPYPHCW RCDTPLIQRA VSSWFVAVTQ FRDRMVELNQ QISWVPGHIK DGQFGKWLEG ARDWSISRNR FWGSPIPVWT SDDPTYPRTD VYGSLDELER DFGVRPSDLH RPMVDELTRP NPDDPTGRST MRRVPEVLDC WFESGSMPYA QVHYPFENRE WFEDHYPGDF IVEYNGQTRG WFYTLHVLAT ALFDRPAFVT CMAHGIVLGD DGQKMSKSRR NYPDVGQVFE RDGSDAMRWF LMSSPILRGA DLVVTEQGIR DSVRQAVLPL WNAWSFLSLY ANAGGVAGSI RTDSTDVLDR YILAKTAELT GEVTAAMDAY DLAGACAAVR VYLEVLTNWY IRRSRQRFWD ADQDAIDTLH TVLETLCRVA APLLPLTTEV IYRGLTGERS VHLTDWPADQ LPLDAELVTV MDEVREVASV ALSVRKAGKL RVRQPLSSMT VAVRDAAALE PFAALLADEV NVRSVLVSEL AEHDERVTRR LTVNARAAGP RLGKQVQQVI KAAKSGDWSV AEDGTVTCGD VVLADGEYTL ELSAAGASSD AVGLLSAGGF VALETTLDDD LVADGLVRDV ARGVQDLRKS AGLDVSDRIE LFVVSDDAIA RSAVLGRWGW LADQVLAVNA ATLEPAPADA LGAADLVAGT GVDAAIRVQL RKAPSGS
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