Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_3790 |
Symbol | |
ID | 8449409 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | + |
Start bp | 4159040 |
End bp | 4159729 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 645042841 |
Product | iron (metal) dependent repressor, DtxR family |
Protein accession | YP_003203077 |
Protein GI | 258653921 |
COG category | [K] Transcription |
COG ID | [COG1321] Mn-dependent transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.00906262 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.458013 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACGACC TGATCGATAC GACCGAGATG TATCTGCGGA CCATCTTCGA GTTGGAGGAA GAGGGCATCG TTCCGCTGCG CGCCAGGATC GCGGAGCGGT TGAACCAGAG CGGGCCGACG GTCAGCCAGA CCGTCGCCCG GATGCAGCGG GACGGCTTGC TGGTGGTCTC CGACGACCGG CACCTGGAGC TCACCGACCT GGGCCGGGAT CGCGCGGTCG CCGTGATGCG CAAGCACCGG CTGGCCGAAC GGCTGCTGCT GGACGTGATC GGGTTGGACT GGCAGGACGT GCACGTCGAG GCCTGCCGGT GGGAGCACGT GATGAGCGAG CAGGTCGAAC AGCGCCTGGT CACCCTGCTC GGCCACCCCC GCACCTCGCC CTACGGCAAC CCCATCCCCG GCCTGGATCA TCTGGGCGAG TCCACGCCCC CGGTCACCGA GACCCATCGC GACTTGATCG GCGCCGACGT CGCCGCCGGG CGCGGCGGCC GGTTCGAGGT CCGCCGGATC ATCGAGATCG TGCAGAACCA GCCCGTGGTG ATGGACCGGC TGCACCGGGC CGGTGTGGTG CCCGGAGCGG TGCTGGAGTT CGAGGTCCGC GGCGACACGA TGGTCGTCGT CGACGGGGCG ATCACCACCG AGCTGTCCCC CGAGATCGCG CACGGGATCC ACGTGCGACC GGCCGCCTGA
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Protein sequence | MNDLIDTTEM YLRTIFELEE EGIVPLRARI AERLNQSGPT VSQTVARMQR DGLLVVSDDR HLELTDLGRD RAVAVMRKHR LAERLLLDVI GLDWQDVHVE ACRWEHVMSE QVEQRLVTLL GHPRTSPYGN PIPGLDHLGE STPPVTETHR DLIGADVAAG RGGRFEVRRI IEIVQNQPVV MDRLHRAGVV PGAVLEFEVR GDTMVVVDGA ITTELSPEIA HGIHVRPAA
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