Gene Namu_3790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_3790 
Symbol 
ID8449409 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp4159040 
End bp4159729 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content70% 
IMG OID645042841 
Productiron (metal) dependent repressor, DtxR family 
Protein accessionYP_003203077 
Protein GI258653921 
COG category[K] Transcription 
COG ID[COG1321] Mn-dependent transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.00906262 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.458013 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACGACC TGATCGATAC GACCGAGATG TATCTGCGGA CCATCTTCGA GTTGGAGGAA 
GAGGGCATCG TTCCGCTGCG CGCCAGGATC GCGGAGCGGT TGAACCAGAG CGGGCCGACG
GTCAGCCAGA CCGTCGCCCG GATGCAGCGG GACGGCTTGC TGGTGGTCTC CGACGACCGG
CACCTGGAGC TCACCGACCT GGGCCGGGAT CGCGCGGTCG CCGTGATGCG CAAGCACCGG
CTGGCCGAAC GGCTGCTGCT GGACGTGATC GGGTTGGACT GGCAGGACGT GCACGTCGAG
GCCTGCCGGT GGGAGCACGT GATGAGCGAG CAGGTCGAAC AGCGCCTGGT CACCCTGCTC
GGCCACCCCC GCACCTCGCC CTACGGCAAC CCCATCCCCG GCCTGGATCA TCTGGGCGAG
TCCACGCCCC CGGTCACCGA GACCCATCGC GACTTGATCG GCGCCGACGT CGCCGCCGGG
CGCGGCGGCC GGTTCGAGGT CCGCCGGATC ATCGAGATCG TGCAGAACCA GCCCGTGGTG
ATGGACCGGC TGCACCGGGC CGGTGTGGTG CCCGGAGCGG TGCTGGAGTT CGAGGTCCGC
GGCGACACGA TGGTCGTCGT CGACGGGGCG ATCACCACCG AGCTGTCCCC CGAGATCGCG
CACGGGATCC ACGTGCGACC GGCCGCCTGA
 
Protein sequence
MNDLIDTTEM YLRTIFELEE EGIVPLRARI AERLNQSGPT VSQTVARMQR DGLLVVSDDR 
HLELTDLGRD RAVAVMRKHR LAERLLLDVI GLDWQDVHVE ACRWEHVMSE QVEQRLVTLL
GHPRTSPYGN PIPGLDHLGE STPPVTETHR DLIGADVAAG RGGRFEVRRI IEIVQNQPVV
MDRLHRAGVV PGAVLEFEVR GDTMVVVDGA ITTELSPEIA HGIHVRPAA