Gene Namu_3771 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_3771 
Symbol 
ID8449390 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp4138060 
End bp4139514 
Gene Length1455 bp 
Protein Length484 aa 
Translation table11 
GC content66% 
IMG OID645042822 
Productcytochrome bd ubiquinol oxidase subunit I 
Protein accessionYP_003203058 
Protein GI258653902 
COG category[C] Energy production and conversion 
COG ID[COG1271] Cytochrome bd-type quinol oxidase, subunit 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.673578 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.369345 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATCCCT TGGGTATTGC CCGCTGGCAG TTCGGGATCA CCACCGTGTA CCACTTCTTG 
TTCGTGCCGA TCACGATCGG CATGGCGTTC TTCATCGCGA TCACCGAGAC CGCGTGGGTC
CGCACCCGCA AGCCCGTGTA CCTGCGGGCC ACGAAGTTCT GGGGCAAGAT CTTCCTGATC
AACTTCGCGA TCGGCGTGGT GACCGGCATC GTCCAGGAGT TCCAGTTCGG GATGAACTGG
TCGAGCTACT CCCGGTTCGT CGGCGACGTC TTCGGCGCTC CGCTGGCCAT GGAGGCCCTG
CTCGCGTTCT TCCTGGAGTC CACGTTCCTG GGGCTGTGGA TCTTCGGCTG GGACAAGCTC
TCGCCGCGCC TGCACTGCGC GTGCATCTGG CTGGTCTCGA TCGGCACCAT GCTCTCGGCG
TTCTTCATCA TGTCGGCCAA CTCGTTCATG CAGCACCCCG TCGGTGTCAC GGTGAACGCC
GACCGCAGCC GGGCCGAGAT GAACGACATC TGGGCGGTGC TGACCCAGCC GCTGAACATG
TGGGCGTACT CGCACGTTAT CGCCGGGGCC ATCCTGTCCG GCGCGGCCAT GTTCGCGGGC
ATCGCGTCGT ACTTCCTGAT GAAGAAGCGC GACGTCGAGG TCTTCCGGCC GGCGGTACGG
TTCGGCCTGG TCGGCATGCT CATCGGATCG CTGGCGGTGA TCGTCACCGG CGACCTGCTG
GCCAAGGTGA TGACCGATGT GCAGCCGATG AAGATGGCCG CCGCCGAGGC GCTGTGGGAC
ACCACCGAGG GCGCGTCGTT CTCGCTGTTC ACGATCGGCA CGCTGGACGG CTCCAGCGAG
GTGTTCTCCA TCCGGGTGCC CGGCGTGCTC TCGTTCATGG CCACCGAGTC GTTCTCCGGC
ACCGTCGAGG GCATCAACGA CGTGCAGGCC CAGTTCGAGG AGCAGTACGG CCCAGGCGAC
TACCGGCCGA TCATCCCGGT CGCCTACTGG ATGTTCCGGA TCATGATGGG CGCCGGCTTC
GTCATGTTGC TGGTCTCGAT CGTCGGCCTG TGGCTGACCC GCAAGGGCCG GCTCCCCGAA
TCCAAGACCG TCTGGCGGCT GGCGATGTTC GCCATCGCCG GACCGGTGGT CGGCCACTCG
GCCGGCTGGA TCTTCACCGA GATGGGTCGC CAGCCCTGGA CGGTGGTCGG GCTCTACCGG
ACCGAGGAAT CGGTCTCGCC GTCGGTCAGC GGCGGCTCGG TGCTGACCTC GTTGATCATC
TTCACGCTGC TGTACGGGAT CCTCGCGGTG GTCGAGGTCG GCCTGGTGGT CAAGTACGTC
AAGATCGGCC CGCCCAGCGA GCAGGAGGCA CTGGCCTCGA TCCGCCGGGG CAAGCCGCGC
AGCGGTGGGT TCGGCGGCGA CGACGAAGGG ACGCCCGCGG ACGCGGACGA GAAGCCACTG
GCGTTCGCCT ACTGA
 
Protein sequence
MDPLGIARWQ FGITTVYHFL FVPITIGMAF FIAITETAWV RTRKPVYLRA TKFWGKIFLI 
NFAIGVVTGI VQEFQFGMNW SSYSRFVGDV FGAPLAMEAL LAFFLESTFL GLWIFGWDKL
SPRLHCACIW LVSIGTMLSA FFIMSANSFM QHPVGVTVNA DRSRAEMNDI WAVLTQPLNM
WAYSHVIAGA ILSGAAMFAG IASYFLMKKR DVEVFRPAVR FGLVGMLIGS LAVIVTGDLL
AKVMTDVQPM KMAAAEALWD TTEGASFSLF TIGTLDGSSE VFSIRVPGVL SFMATESFSG
TVEGINDVQA QFEEQYGPGD YRPIIPVAYW MFRIMMGAGF VMLLVSIVGL WLTRKGRLPE
SKTVWRLAMF AIAGPVVGHS AGWIFTEMGR QPWTVVGLYR TEESVSPSVS GGSVLTSLII
FTLLYGILAV VEVGLVVKYV KIGPPSEQEA LASIRRGKPR SGGFGGDDEG TPADADEKPL
AFAY