| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_3768 |
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| Symbol | |
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| ID | 8449387 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | - |
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| Start bp | 4134319 |
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| End bp | 4136040 |
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| Gene Length | 1722 bp |
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| Protein Length | 573 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 645042819 |
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| Product | ABC transporter, CydDC cysteine exporter (CydDC- E) family, permease/ATP-binding protein CydD |
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| Protein accession | YP_003203055 |
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| Protein GI | 258653899 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4988] ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components |
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| TIGRFAM ID | [TIGR02857] thiol reductant ABC exporter, CydD subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.000524247 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.529379 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGACCCT TCGACCCGCG ACTGGCCCGG TACGCCACCG GCGTGCGCCG GTTGATCGTG
CTGTCCGTGG TCCTGGGTGT TCTGTCGGCG CTGGTGGTGA TCGTCCAGGC CGTCCTGCTG
GCCGGGATCC TGGCCGAGGT GATCATCGGC GGGGCCGGCC TGGAACAGGT CGCCGGCCGC
CTGGGGGTGC TGGCCGTGGT GATCGCGATC CGCGCCGGGC TGGCCTGGGC GTCGGAGGAA
CTGGCCGGGC GCAGTGCGTC GGCGGTCACC GCCGGGCTGC GGCGCGATCT GGTGCTGCAC
GCGGCCGCGT TGGGTCCCCG CTGGCGATCC GGCGAACAGA CCGGGCGGCT CGCCGTCCTG
GCCACCACCG GGGTCGAATC GCTGCACACC TACCTGGCCC GCTACCTGCC GCAGCTGGTG
CTCTCGGTGG TGGTGCCGGT GATGATGCTG ATCTACCTGT TCAGCGCCGA CCTGACCAGC
GCCATCATCG TGCTGGTCAC CCTGCCGTTG ATCCCGCTGT TCATGGCGCT GGTCGGCTGG
TACACCGACC GGCAGACCCG GGCCAAGTGG GCCAGCCTGT CCCGGTTGGC CGCGCACTTC
ACCGACGTCG TGGCCGGGCT GCCCACCCTG AAGGTGTTCG GCCGGGCCAA GGCCCAGGCC
GAGGCGGTCC GCCGGGTGAC CGACGACTAC CGCCGGTCCT CGATGGTCAC TCTGCGGGTG
GCGTTCCTGT CCTCGATGGT GCTCGAACTG CTCGCCTCGT TGTCGGTGGC CCTGGTCGCC
GTGGCGATCG GGCTGCGGCT GGTGTACGGC GGGCTGACCC TGGAGGTGGG CCTGGCCGTG
CTGATCCTGG CCCCCGAGGC CTACCTGCCG CTGCGGGCGC TGGGCACCCA GTTCCACGCC
GCGGCGGACG GGGTGGAGGC GGCCGGCCGG GTGCTGGACG TGCTGGACAC GCCGCCGCCG
CCGGCCGGCA CCCGCCGCGA TCTGGCCGGG CCGTTCGAGA TCGGCCTGCA GGACGCGACG
GTGGGCCGCC CGGGGGAGCG CGGCGCCGTC GGCCCGCTGA CCCTGAGCGT GCCGCCGGGT
CAGGTGACCG TCGTCATCGG CGACAGCGGC GCCGGCAAGA CCACGTTGTT GCAGCTGATC
GCGGGGGTGG TTCGACCCGA CTCCGGTGCG GTGGACGTGC GTGGGGCCGG CACCGACCCC
GTCCCGGTGG CCGAGCTGGA TCCCGGATGG TGGCGCGGCC AGCTCGGGTG GGCGGCCCAG
GGCGGCGCCC TGCAGGCCGG CACCATCCGA CAGAACCTGA GCCTGGGTCA CCCCGGTCTG
GACGAGGCGG CGCTGCGCGC GGCCCTGGTC GCGGTGGACG CGGCCGATTT CGTCGATGCG
TTGCCCGGTG GCCTGGAGCA TCGGCTCGGT GACGGTGGGG CCGGTCTGTC GCAGGGCCAA
CGGCAGCGCC TGACGCTGGC CCGGGCGTTG GCCCGGCCGG CCCCGGTGCT GCTGCTGGAC
GAGCCCACCG CCGCGCTGGA CGGCGACACG GAGCAACGGG TGCTGGCCGG CATCCGGCGA
TACCTCGCCG GACGCACGGT GGTGCTGGTC ACCCACCGGC CCGGCCCGCT CGCCCTGGCC
GATCACGTCG TGCGGCTGGA GACGGCCGCG ATCGAGCAGA CCGATCCCGC GGACGGCGAG
GCCGGCACCG CGCTGGCCAC CACCGGGGTG AACCCGTGGT GA
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| Protein sequence | MRPFDPRLAR YATGVRRLIV LSVVLGVLSA LVVIVQAVLL AGILAEVIIG GAGLEQVAGR
LGVLAVVIAI RAGLAWASEE LAGRSASAVT AGLRRDLVLH AAALGPRWRS GEQTGRLAVL
ATTGVESLHT YLARYLPQLV LSVVVPVMML IYLFSADLTS AIIVLVTLPL IPLFMALVGW
YTDRQTRAKW ASLSRLAAHF TDVVAGLPTL KVFGRAKAQA EAVRRVTDDY RRSSMVTLRV
AFLSSMVLEL LASLSVALVA VAIGLRLVYG GLTLEVGLAV LILAPEAYLP LRALGTQFHA
AADGVEAAGR VLDVLDTPPP PAGTRRDLAG PFEIGLQDAT VGRPGERGAV GPLTLSVPPG
QVTVVIGDSG AGKTTLLQLI AGVVRPDSGA VDVRGAGTDP VPVAELDPGW WRGQLGWAAQ
GGALQAGTIR QNLSLGHPGL DEAALRAALV AVDAADFVDA LPGGLEHRLG DGGAGLSQGQ
RQRLTLARAL ARPAPVLLLD EPTAALDGDT EQRVLAGIRR YLAGRTVVLV THRPGPLALA
DHVVRLETAA IEQTDPADGE AGTALATTGV NPW
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