| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_3767 |
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| Symbol | |
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| ID | 8449386 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | - |
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| Start bp | 4132574 |
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| End bp | 4134238 |
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| Gene Length | 1665 bp |
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| Protein Length | 554 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 645042818 |
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| Product | Sigma 54 interacting domain protein |
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| Protein accession | YP_003203054 |
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| Protein GI | 258653898 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4987] ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components |
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| TIGRFAM ID | [TIGR02868] thiol reductant ABC exporter, CydC subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.0382723 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.753428 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCCGC TGGCCCGGTT GTGGTCCCAG GCGGCCGGGG TGCGCTGGCG ACTGCTCGGC
GCCGCCGTCG TCGGCGCGTT GGCCACCGGA TGCGCGGTCG GCCTGATGGC CACGTCGGCC
TGGCTGATCG CCCGGGCCGC CCAGCAACCA CCCGTGCTGT ACCTGATGGT CGCCGTGGTC
TCGGTCCGGA CGCTGGGCAT CGGCCGCGGC GTGCTGCGCT ACGTGGAGCG GCTCATCTCG
CACGACGCCG CCTTCCGGGT GTTGGGCGGC ATCCGGCAGC GGCTGGTCGC GCACCTGGCG
TTGATCGCGC CGGCCGCCCT GCCGGTGTGG CGGCGCGGGG ATCTGCTGGC CCGCACCGTC
GACGACGTCG ACGACGCCGG GGACGCCTTC CTGCGCGGGC TGCTGCCGTT GGCCGGGGCC
GCCCTGGTCG GGGCCGGCAC CGTCGTGCTG CTGGCGCTGA TCCTGCCGGC CGCCGGGGTG
GCGCTGGCCG TGGCGCTGGT GGTGGCCTGC GTGCTGGTGC CGGTGCTCTC GGCCCGCCGC
TCCGCCCGGG TCGAGGGGCA AGCCGTGCAG ATCCGGGCCG GCCGGACCCG GCTGGTCACC
GAGCTGCTGG ACGACCTGCC CGAGCTGACC GTCTCCGACG GGCTGGCCGG GCGGCTCGAC
GAGCTCGACC AGATCGAGAC CGACAGCCGG CGGATCGCGG CCGGGACCGC CCGCGCGGCC
GGGGTGGCCG CCGCGGTCGC CGTCGCGGCC ATGGGCGCGG CCGTCTGGGT CGCGGCCTGG
TTCGGGGTGC CGGCGGTCGC CGCGGCCGAC CTGAACCCGG TGCTGCTGGC CGTGATCGTG
CTCACCCCAC TGGCCCTGAC CGACACCGTG CAGGCGGTCG GGGTGGCCGC CGCGGCCCTG
CATCGGGCCA CGGCCGCGCT GCGCCGCCTG TTCGCCGTGA TGGACACCCC GCCGGTCACC
GCACCTCCGC CGGTTCACCC CCGACCGCTG CCGGAGCCGG CCGCCGGCGC GATCATCCGG
CTGCGCGGGG TCGGCGCCCG CTGGCCCGGG GCGGACCGCG ACGCGCTGAC CGACATCGAC
CTGGACCTGG TGCCGGGCCG GCGGATCGTG GTGGCGGGGG AGTCGGGTTC GGGCAAATCC
ACGCTGCTGG CCGTGCTGCT GGGCTTCCTC ACCCCGACCA CCGGGCGGAT CACCCTGGAC
GGGGTCGACG TCGCCGAGCT CGATCCCGAC CAGGTCCGCA CCCGGTTCTC CTGGTGCGAC
CAGAGCGCGC ACCTGTTCGA CTCCACGGTG CTGGAGAACG TGCGGCTGGC CCGCCCGGAC
GCCGACGCGG CGCAGGTCGA GGCGGCCCTG CGCGAGGCCG GCGCCGGCGG CTGGCTCGAC
GGGCTGCCCC AGGGCCTGGA CACTCCGGTC GGCGAACACG GGCGGGCGGT CTCCGGCGGC
GAGCGTCAGC GCATCGCGCT GGCCCGGGCG ATCCTGGCCG ACCGGCCGGT GCTGCTGGCC
GACGAACCGG CCGCGCATCT GGACGGGGCC ACCGCCGAGT CCGTCACCGC CCGCATCATG
CGACCCGACC CGGGCCGGTG CGTGCTGCTG GTCTCGCACC GCCCGCAGGA CGAGGCCCTG
GCCGACCAGG TGGTCCGGCT CGCCGGCGGG CGCCGGGTCG GCTGA
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| Protein sequence | MAPLARLWSQ AAGVRWRLLG AAVVGALATG CAVGLMATSA WLIARAAQQP PVLYLMVAVV
SVRTLGIGRG VLRYVERLIS HDAAFRVLGG IRQRLVAHLA LIAPAALPVW RRGDLLARTV
DDVDDAGDAF LRGLLPLAGA ALVGAGTVVL LALILPAAGV ALAVALVVAC VLVPVLSARR
SARVEGQAVQ IRAGRTRLVT ELLDDLPELT VSDGLAGRLD ELDQIETDSR RIAAGTARAA
GVAAAVAVAA MGAAVWVAAW FGVPAVAAAD LNPVLLAVIV LTPLALTDTV QAVGVAAAAL
HRATAALRRL FAVMDTPPVT APPPVHPRPL PEPAAGAIIR LRGVGARWPG ADRDALTDID
LDLVPGRRIV VAGESGSGKS TLLAVLLGFL TPTTGRITLD GVDVAELDPD QVRTRFSWCD
QSAHLFDSTV LENVRLARPD ADAAQVEAAL REAGAGGWLD GLPQGLDTPV GEHGRAVSGG
ERQRIALARA ILADRPVLLA DEPAAHLDGA TAESVTARIM RPDPGRCVLL VSHRPQDEAL
ADQVVRLAGG RRVG
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