| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_3764 |
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| Symbol | |
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| ID | 8449383 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | + |
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| Start bp | 4129727 |
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| End bp | 4131073 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 645042815 |
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| Product | RNA polymerase, sigma 70 subunit, RpoD subfamily |
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| Protein accession | YP_003203051 |
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| Protein GI | 258653895 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02393] RNA polymerase sigma factor RpoD, C-terminal domain
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.343389 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCAGGCG CAGCAACCTC TCCCAGTTCG ACAAGGACCC GACGGTCGGC TTCGGGCGAT
CCCGGGGCAG CCATCAGGTC CGCTCCCCAG GCGGCCGATC CGGCGACGGA CCCGACCGCC
CTGGAGGCGA CCGACGAGGC TCCCGAAGAG GAGCTCATCG GTGGGGCCGA CGACGTCGAA
CTGATCGATG TCGAACAGGT CGCCGACGAC GCGACCGCGA CCGGCACCGC GGTGGTCGGG
GTCCTGGAGA TCGACGAGGC GGACGAGGAC GACGAGGAGG AGGCCGCGAC CCCGGCGGTG
GCCAAGGCCA AGCCCGCCGG CAAGGACGCG ACCCCCGACA AGCCGGGCGA GTCCGAGGAG
TTCACCTGGG ACGACGAGGA GGAGTCCGAG GCGCTCAAGC AGGCGCGCAA GGACGCCGAG
CTGACCGCGT CGGCCGACTC CGTCCGCGCC TACCTCAAGC AGATCGGCAA GGTCGCGCTG
CTCAACGCCG AGGAAGAGGT GGACCTGGCC AAGCGGATCG AGGCCGGCCT CTACTCCTCC
GAGCGGATGC GCCAGTTCGA GGAAGCCGGC GAGCGACTGC CCAACCAGAT GCGGCGCGAC
CTGCGCTGGA TCAAGCGGGA CGGCGAGCGG GCCAAGAACC ACCTGCTCGA GGCCAACCTG
CGGCTGGTCG TCTCGCTGGC CAAGCGCTAC ACCGGCCGCG GCATGGCGTT CCTGGACCTG
ATCCAGGAGG GCAACCTCGG TCTGATCCGC GCGGTCGAGA AGTTCGACTA CACCAAGGGC
TACAAGTTCT CCACCTACGC CACCTGGTGG ATCCGGCAGG CGATCACCCG GGCCATGGCC
GACCAGGCCC GCACCATTCG TATCCCGGTG CACATGGTCG AGGTCATTAA CAAGCTCGGC
CGCATCCAGC GCGAGCTGCT GCAGGACCTG GGCCGCGAGC CCACTCCGGA AGAGCTCGCC
AAGGAAATGG ACATCACCCC GGACAAGGTG CTGGAGATCC AGCAGTACGC CCGGGAGCCC
ATCTCCCTCG ACCAGACCAT CGGTGACGAG GGTGACTCGC AGCTCGGTGA CTTCATCGAG
GACTCCGAGG CCGTCGTGGC CGTGGACGCG GTCTCGTTCA CCCTGCTGCA GGACCAGCTG
CAGGCCGTCC TGCAGACCCT GTCCGAGCGG GAGGCCGGCG TCGTCCGGCT GCGCTTCGGC
CTGACCGATG GTCAGCCGCG CACCCTGGAC GAGATCGGCC AGGTCTACGG GGTCACCCGC
GAGCGGATCC GGCAGATCGA GTCCAAGACG ATGTCCAAGC TGCGGCACCC GTCGCGCTCC
CAGGTGCTAC GCGACTACCT GGAGTAA
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| Protein sequence | MAGAATSPSS TRTRRSASGD PGAAIRSAPQ AADPATDPTA LEATDEAPEE ELIGGADDVE
LIDVEQVADD ATATGTAVVG VLEIDEADED DEEEAATPAV AKAKPAGKDA TPDKPGESEE
FTWDDEEESE ALKQARKDAE LTASADSVRA YLKQIGKVAL LNAEEEVDLA KRIEAGLYSS
ERMRQFEEAG ERLPNQMRRD LRWIKRDGER AKNHLLEANL RLVVSLAKRY TGRGMAFLDL
IQEGNLGLIR AVEKFDYTKG YKFSTYATWW IRQAITRAMA DQARTIRIPV HMVEVINKLG
RIQRELLQDL GREPTPEELA KEMDITPDKV LEIQQYAREP ISLDQTIGDE GDSQLGDFIE
DSEAVVAVDA VSFTLLQDQL QAVLQTLSER EAGVVRLRFG LTDGQPRTLD EIGQVYGVTR
ERIRQIESKT MSKLRHPSRS QVLRDYLE
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