| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_3751 |
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| Symbol | |
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| ID | 8449370 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | - |
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| Start bp | 4116731 |
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| End bp | 4118734 |
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| Gene Length | 2004 bp |
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| Protein Length | 667 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 645042802 |
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| Product | deoxyxylulose-5-phosphate synthase |
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| Protein accession | YP_003203038 |
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| Protein GI | 258653882 |
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| COG category | [H] Coenzyme transport and metabolism
[I] Lipid transport and metabolism |
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| COG ID | [COG1154] Deoxyxylulose-5-phosphate synthase |
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| TIGRFAM ID | [TIGR00204] 1-deoxy-D-xylulose-5-phosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.209396 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0527703 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACACAGC AGGGTCGCCC CGGCACACCG GACGGGCAGG TGCCGGACGG ATTGCGGGAC
ATGTCGCCGG CTCGGCTCCG GGAGCTCTCG CCGTCGCAGC TGACCGAGTT GGCGGCCGGC
ATCCGCGACC TGCTGGTCGA GCAGACGTCC AAGCGAGGCG GGCACCTCGG GCCGAACCTG
GGCATCGTCG AGCTGACCAT CGCGCTGCAC CTGGTCTTCG ACTCGCCCCG CGACCCGGTG
CTGTTCGACA CCGGTCACCA GGCCTACGTG CACAAGATCC TCACCGGCCG AGGCGGGCAG
TTCGACACCC TGCGGACCCG GGGCGGCCTG TCCGGGTACC CGAGCCGGGC CGAGTCCGAG
CACGACTGGA TCGAGAACTC GCACGCGTCG ACCTCGCTGT CCTACGCCGA CGGGCTGGCC
AAGGCGATCG CCCTGCGCGG GGAGAGCGAC CGCACCGTCG TCGCGGTGAT CGGCGACGGC
GCCCTGACCG GGGGGATGGC CTGGGAGGCG CTGAACAACA TCGCCGGGGC CGATCGCCCG
GTGGTCATCG TGCTCAACGA CAACGGCCGC TCCTACGCGC CCACCACCGG CGGGATGGCG
CAGCGGATGG CGGCGCTGCG GCTGCGCCCG GGCTACGAGC GGATGCTCGG CCGGGTCAAG
CACACCCTGC CCCGCACCCC GGTCGTCGGC GGACCGTTGT ACGCCGCGCT GCACGCGGCC
AAGTCCGCGG TCAAGGACTG GTTCGTGCCC CAGACGATGT TCGCCGACCT GGGCCTGAAG
TACGTCGGTC CGGTCGACGG GCACGACGTC GAGGCGCTGG TCCAGGCGCT GAGCGGGGCT
CGCTCGTTCC GCGGCCCGGT GGTCGTGCAC TGCGTCACCC GCAAGGGTCT GGGCTATCAC
CCGGCGGAGA CCGACGAGGC CGAGCAGATG CACTCGCCGC CGGCGTTCGA CCCGGCGACC
GGCAAGCCCG TCGCCGCGAC CACCACCACC TGGACCCACG TGTTCGGCCG GGAGATGGTC
GTGGCCGGGG CCGAGCGGCC GGACGTGGTC GCCATCACCG CGGCCATGAG CGGGCCGACC
GGGCTGACCT CCTTCGGCAC CGCCTTCCCG GACCGCATGT TCGACGTCGG CATCGCCGAG
CAGCACGCGC TGACCTCGGC GGCCGGCCTG GCCATGGGCG GCATGCACCC GGTGGTCGCG
GTGTACTCGA CATTCCTGAA CCGGGCGTTC GACCAGCTGC TGATGGACTG CGCGTTGCAC
CGGCTCGGGG TCACCGTGGT GCTCGACCGG GCCGGGGTGA CCGGCGAGGA CGGGCCCAGC
CATCACGGCA TGTGGGACAT GTCGCTGGCC GCGATCGTGC CCGGGCTGCG GATGGCCGCC
CCCCGGGACG CGGCGACCCT GGCCGAGGAG CTGCACGAGG CGCTGGCGGT CACCGACGGG
CCGACCGTCC TGCGGTTCCC CAAGGGCGCG GTGCCGGCCA CCATCCCCGC GGTGCGACGA
TTCGTGGCCG CCGAACAGCC GGCCGGTGGG TCGTCCGTCG GCGGGGTGGA CATCCTGGTC
GAGCCGGTCG GCCGGCAGGA CCGGGACGTG TTGCTGGTGG CTGTGGGTGC GTTCGCCGCG
ATGGCCGTGG AGGCGGCCCG GCTGCTGGCC GCCCAGGGCA TCGGCGTGAC CGTCGTCGAC
CCCCGCTGGG CGCTGCCGGT CCCGGCCGAG ATCGACGCGC TGGCCGCGCA GCACCGCCTG
GTGGTCACGG TGGAGGACGG GGGCCGCTCC GGTGGGGTGG GCGCCGCGGT CACCGACCGG
TTGGCCGACA CCGACGTCCC GGTGCACGTC CTGGCGTTGC CGCAGCAGTT CCTGGAGTCC
GCGTCCCGGG GCGAACTGCT GGTCGACCTG GGCCTGACCG GTCAGGCGGT GGCCCGCGGC
ATCACCGAAC TCATCGCCCG GCGGGCGATG GACGTCTCCG GCCCGGTCGT CTCCGGCAGC
GGGCCCGAGT CGATCGAGCG GTAG
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| Protein sequence | MTQQGRPGTP DGQVPDGLRD MSPARLRELS PSQLTELAAG IRDLLVEQTS KRGGHLGPNL
GIVELTIALH LVFDSPRDPV LFDTGHQAYV HKILTGRGGQ FDTLRTRGGL SGYPSRAESE
HDWIENSHAS TSLSYADGLA KAIALRGESD RTVVAVIGDG ALTGGMAWEA LNNIAGADRP
VVIVLNDNGR SYAPTTGGMA QRMAALRLRP GYERMLGRVK HTLPRTPVVG GPLYAALHAA
KSAVKDWFVP QTMFADLGLK YVGPVDGHDV EALVQALSGA RSFRGPVVVH CVTRKGLGYH
PAETDEAEQM HSPPAFDPAT GKPVAATTTT WTHVFGREMV VAGAERPDVV AITAAMSGPT
GLTSFGTAFP DRMFDVGIAE QHALTSAAGL AMGGMHPVVA VYSTFLNRAF DQLLMDCALH
RLGVTVVLDR AGVTGEDGPS HHGMWDMSLA AIVPGLRMAA PRDAATLAEE LHEALAVTDG
PTVLRFPKGA VPATIPAVRR FVAAEQPAGG SSVGGVDILV EPVGRQDRDV LLVAVGAFAA
MAVEAARLLA AQGIGVTVVD PRWALPVPAE IDALAAQHRL VVTVEDGGRS GGVGAAVTDR
LADTDVPVHV LALPQQFLES ASRGELLVDL GLTGQAVARG ITELIARRAM DVSGPVVSGS
GPESIER
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