| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_3698 |
|---|
| Symbol | |
|---|
| ID | 8449317 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | + |
|---|
| Start bp | 4059933 |
|---|
| End bp | 4061114 |
|---|
| Gene Length | 1182 bp |
|---|
| Protein Length | 393 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 645042759 |
|---|
| Product | integrase family protein |
|---|
| Protein accession | YP_003202995 |
|---|
| Protein GI | 258653839 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4974] Site-specific recombinase XerD |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.0843425 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.150744 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCAGA GCGTGATGGC CCGACCCGAC GGCGGGCCTC GCACGTGGAC GGTGATCGAT
CAGGGATACC GGACGGTCGG ACCGGTCGAG GAGTGGCTGG AGGCCCACCG GCATCTTTGG
TCGCCGAACA CGGTCCGCGG GTACGCGACC GCGCTGAGCC AGTGGTGGAC GTTCCTTGAA
CAGCGGGCCG AGTCCGGGCG GTGGAACGAG ATCGGCGTGC CGACGGTGTC GGCGTTCGTG
TCCTGGATGC GCAACGGGCG CCGGGTCGAG CGTTCCCTGG TGCCGGAGGA CGGGCCGTCG
CCGGAGACGA TGCAGGCGCG GCTGGCCGCG GTCATCTCCT TCTACACGTG GCACGAAGCC
GTGTCCGGCG TTCCGGTGGC CGGCCGGTTG ATGCGTGGAG CGCCGCGGCG GGCAGTGGCC
CGGGGGCTGC TGTCCCATCT GGATGCCCGC TCGGGGCCCG CTCCGACGTC GCTGGTCCGG
GTGCGCCGCA GCCGGCGGCA TCGTCCGCCG TTGCTGATGC CCCAGCAGAT CCAGGCGATC
CTGGATGGCT GCGCCACCTA CGATCCAGAC ACCGGTGAAT GGGTCGGAAA CCTGCGTGAC
CGGCTGCTTT TCGCCGTTCT TGCGGAGAGC GGCATGCGGA TCGGCGAGGC GTTGGGTTTG
CGGATCAGCG ACTTCGTGAT GGGTCGCGGC GGCACCCCGT TCATCGAGAT CGTGCCTCGC
GCGGACAACA CCAATGGGGC GCGGGTGAAG ATGATGCGTC CCCGCCGGGT CTACGTCGGC
GCCGATCTCG AGCGGCTGTT CGCCGACTAC CTGACCCTCC TGGCCTGCAC AGCAGCCGAT
ATGGGCATCG CGGTGGCGGC GGACTCGCCG CTGCTGGTCA ACCTGCAACG GCCGCCGCTG
CTGGCTGCGC TGCACGAGGG CACCGTCCGC GACAAGACGG CCGCGCTGCG GAAGAAGGGG
ATCGGCCCGC CCGGGTGGAC CCCGCACTGG TTCAGGCATA GCCACGCGAC CGCGTTGCTG
CTGGCCGGCA CGGCGGAGTG GGTGGTGTCC CGTCGGCTGG GGCACGCCCA CGTCCAGACC
ACGCTGGACC TCTACGGCTG GGTCCGCGAG GACGAGGCGC TGCGGGCGGC GGCGAACTGG
ACGTCGTACG CGTCCAATTG GCGGGTGACC GATGCGCCGT GA
|
|---|
| Protein sequence | MAQSVMARPD GGPRTWTVID QGYRTVGPVE EWLEAHRHLW SPNTVRGYAT ALSQWWTFLE
QRAESGRWNE IGVPTVSAFV SWMRNGRRVE RSLVPEDGPS PETMQARLAA VISFYTWHEA
VSGVPVAGRL MRGAPRRAVA RGLLSHLDAR SGPAPTSLVR VRRSRRHRPP LLMPQQIQAI
LDGCATYDPD TGEWVGNLRD RLLFAVLAES GMRIGEALGL RISDFVMGRG GTPFIEIVPR
ADNTNGARVK MMRPRRVYVG ADLERLFADY LTLLACTAAD MGIAVAADSP LLVNLQRPPL
LAALHEGTVR DKTAALRKKG IGPPGWTPHW FRHSHATALL LAGTAEWVVS RRLGHAHVQT
TLDLYGWVRE DEALRAAANW TSYASNWRVT DAP
|
|---|
| |