Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_3683 |
Symbol | |
ID | 8449302 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 4040847 |
End bp | 4042517 |
Gene Length | 1671 bp |
Protein Length | 556 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 645042747 |
Product | glucose-methanol-choline oxidoreductase |
Protein accession | YP_003202983 |
Protein GI | 258653827 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.642564 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0444916 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTTCT ACGGGAACAT CCGGAGCCGC AACGAATCGG CCTGGCTGCT GCCGACCGAC GGGTCCCGGA CCGATCACCG GCTACGCGCC GACATGCGCC GCTACGCCGA CCACGACGAG GTCGACCTGG TGGTGGTCGG AGCCGGCGCC GGCGGCAGTG TCCTGACGCA GCGACTGGCC CGCGCGGGAT GGAGCGTGAT CTGCCTGGAC GCCGGGCCGT TCTGGGACCC CGACGCCGAC TGGGTCAGCG ACGAACGCGC CTCGCACACC CTGTACTGGA CCGACCCGCG GCAGATCGGC GGCGCCGACC CCGTCCCGTT GGGCTCCAAC AACTCCGGCC GCGGCGTCGG CGGCTCCATG ATCCACTACG CCGGATACAC ACCCCGCTTC CACCCATCCG ATTTTCGAAC CCGCACCACC GAAGGAGTCG GAGCCGACTG GCCCATCGCC TACAGCGACC TCCGGCCGCA CTACGAACAA CTTGAAGCCG AACTGCCCGT CGCCGGCCAG GACTGGCCCT GGGGTGACCC GCACGGCTAC CCCCACCACC CGCACCGAGT GTCCGGCAAC GGGGAGATCT TCCTCCGCGG CGCCGCCGCT GCCGGCATCA CCGCCCGGGT CGGACCCGTC GCGATCACCA ACGGCCGCTT CGGGAACCGC CCGCACTGCA TCTACCGAGG TTTCTGCCTG CAGGGCTGCA AGGTCAACGC CAAGGCCAGC CCGCTGATCA CCCACATCCC CGACGCCCTG GCGCACGGCG CGGAAATCCG ACCCGACAGC CACGTCAGCC GGGTCCTGGT CGACGACCGC ACCGGCCGGG TCACCGGAGT CACCTATCTC CGGGCCGGAG TGGAGCACCG GCAATGGGCC AGGGCCGTCG CCGTGGCCGG CTACAGCATC GAGACCCCGC GGCTGCTGCT GCTCTCCGCC TCCCCCCGGT TCCCCGACGG GCTCGGCAAC GACCACGACC AGGTCGGCCG CTACCTGATG GTCCAGGGCG CCCCGCAAAC CGCCGGCCGG TTCGACGACG AGATCCGGAT GTACAAGGCA CCGCCGCCGG AAGTGAGCAG CGAACAATTC TACGAAACCG ACCCCGGCAA GCCCTACCGA CGCGGATGGT CCATCCAAAC CGTCAGCCCA CTGCCGATCA CCTGGGCCGA ACACGTTACT GCGCAGGGAC ACTGGGGTGA ACCGTTGCGG GAATACATGC GCGACTACGT GCATTGGGCC ACCCTCGGCG CGCTCTGCGA ATTCCTCCCC GATCCCGACA ACCGCGTCAC CCTGGCCGAG GAAAAGGATC GGCACGGGCT GCCCGTCGCG CACTTCGCCT ACACCCAGAC CAGCAACGAC CGGCTGCTGA TGCGCGCCGC GCAGGACTCG ATGGAGACGA TTCTGCATGC GGCCGGAGCA GGCGAGGTCA TCACCATCGA CCGGTACGCC CACCTCGTCG GCGGCGCGCG GATGGCCGAC CGACCCCAGG ACGGGGTCGT CGACGCCGAC CACCGGGTGT TCGGCGTCCC CAACCTGTTC ATCGTCGACG GCAGTGTTCT GCCCACCCAG GGCGCTGCCA ACCCCGCCCT GACCATCATG GCGCTGGCCG CCCGCGCCGC ACACCGGCTG ACCACCCGGC GGGTCCACGC GGCCGCTGCG GCGCCGGCAG GCGCGTCGTG A
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Protein sequence | MTFYGNIRSR NESAWLLPTD GSRTDHRLRA DMRRYADHDE VDLVVVGAGA GGSVLTQRLA RAGWSVICLD AGPFWDPDAD WVSDERASHT LYWTDPRQIG GADPVPLGSN NSGRGVGGSM IHYAGYTPRF HPSDFRTRTT EGVGADWPIA YSDLRPHYEQ LEAELPVAGQ DWPWGDPHGY PHHPHRVSGN GEIFLRGAAA AGITARVGPV AITNGRFGNR PHCIYRGFCL QGCKVNAKAS PLITHIPDAL AHGAEIRPDS HVSRVLVDDR TGRVTGVTYL RAGVEHRQWA RAVAVAGYSI ETPRLLLLSA SPRFPDGLGN DHDQVGRYLM VQGAPQTAGR FDDEIRMYKA PPPEVSSEQF YETDPGKPYR RGWSIQTVSP LPITWAEHVT AQGHWGEPLR EYMRDYVHWA TLGALCEFLP DPDNRVTLAE EKDRHGLPVA HFAYTQTSND RLLMRAAQDS METILHAAGA GEVITIDRYA HLVGGARMAD RPQDGVVDAD HRVFGVPNLF IVDGSVLPTQ GAANPALTIM ALAARAAHRL TTRRVHAAAA APAGAS
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