| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_3670 |
|---|
| Symbol | |
|---|
| ID | 8449289 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | - |
|---|
| Start bp | 4023913 |
|---|
| End bp | 4024638 |
|---|
| Gene Length | 726 bp |
|---|
| Protein Length | 241 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 645042735 |
|---|
| Product | cation efflux protein |
|---|
| Protein accession | YP_003202971 |
|---|
| Protein GI | 258653815 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0053] Predicted Co/Zn/Cd cation transporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 0.306351 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.190845 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCACGG TGCCGTTGTC GTTGCCGTCG GCGGGTCCGG ATGCGGCTCG TCGAGCGGTG
TTGTCGCGGC GGATCCGGTG GTTCGTGACG GCCACGATCG CCTACAACGT GATCGAGGCG
GTCGTTGCGA TCAGCGCCGG CACGGTCGCG TCGTCGTCGG CGCTGATCGG GTTCGGTCTG
GACTCGGTCA TCGAAGTGAC ATCGGCGGCC GCGGTGGCGT GGCAGTTCGC CGCGAAAGAC
CCGCAGGCCC GGGAACGGAC CGCGCTGCGG ATCATCGCCT GGTCGTTCTT CGCGCTCGCC
GCCTATGTCG CCTTTGACGC GGTCACCTCG CTGTTCGGTG ACACGCAGGC TCGCCATTCC
ACGGTCGGGC TGATACTTGC CGCGGTGAGC CTATTGGTGA TGCCCTGGCT GTCCTGGGGG
CAGCGCCGCG CCGGCCGGCA GCTCAACTCA CGGTCCGCGG TGGCGGACTC CAAGCAGACA
CTGTTGTGCA CCTACCTGTC GGGGGTGCTG CTGGTCGGTT TGGCGTTGAA CTCGCTGCTG
GGCTGGTCCT GGGCGGACCC GATCGCCGCG CTGGTCATCG CCGCGGTGGC CGTCAAAGAA
GGCCGGGATG CGTGGAAGGG CGACGCCTGC TGCGCCCCGA CACCGGCTGA TCGAGCCGTT
TCCGCTCCGA TCGCGGCCGC CGGTGAGGTG GCCGGCTGTG GCGGCGGGTG CGATTGCTGC
CGGTGA
|
|---|
| Protein sequence | MATVPLSLPS AGPDAARRAV LSRRIRWFVT ATIAYNVIEA VVAISAGTVA SSSALIGFGL
DSVIEVTSAA AVAWQFAAKD PQARERTALR IIAWSFFALA AYVAFDAVTS LFGDTQARHS
TVGLILAAVS LLVMPWLSWG QRRAGRQLNS RSAVADSKQT LLCTYLSGVL LVGLALNSLL
GWSWADPIAA LVIAAVAVKE GRDAWKGDAC CAPTPADRAV SAPIAAAGEV AGCGGGCDCC
R
|
|---|
| |