Gene Namu_3643 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_3643 
Symbol 
ID8449262 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand- 
Start bp3997956 
End bp3998636 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content73% 
IMG OID645042708 
ProductGTP cyclohydrolase I 
Protein accessionYP_003202944 
Protein GI258653788 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0302] GTP cyclohydrolase I 
TIGRFAM ID[TIGR00063] GTP cyclohydrolase I 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0117786 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0659308 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGCGG CTCTCCCGCA GTCCCCCAGC GCACGGCCCC GCCCCGGGCC GCCGGAACCG 
GTCAACCGGC GTCATCATCA CCCGCTGCGG GTGGTCCACC CGACGGCACC GGTCGATCTG 
GCCGCCGCGG AACGCGCCGC GGCCGCCTTC CTGGCCGCGC TCGGCGTGGA CGTGGCCACC 
GAGAATCGAC GGGACACCCC GGGCCGGATG GCCCGGGCCT ACGCAGAGAT GTTCACCCCC 
CGGCCCTTCG ACCTGACCAC CTTCCCCAAC GACGACGGCT ACGACGAGAT GGTGCTCGCC 
CGGGCCATTC CGGTGCAGTC GGTGTGCGAG CACCATCTGT TGCCGTTCGT CGGGGTCGCC 
CACGTCGGGT ACCTGCCCGG AGACCGGATC CTCGGGTTGT CGAAGCTGGC CCGGGTGGTG 
GAGTTGTTCG CCCGGCAGCC CCAGGTGCAG GAGCGGCTGA CCCAGCAGGT CGCCGACTGG 
CTGCAGACCA CCCTGGAGCC CCGAGGCGTG GGCGTGGTCA TCGAGGCCGA GCACCTGTGC 
ATGACGATGC GTGGTGTCCA CGCCGACGGG GTCACCACCG TCACCTCGGC CGTGCAGGGG 
CACCTGCGGC AGGACGCCGC CGCCCGCGCC GAGTTCTTCG CCCTCGCCCT GCCGCGGCCG 
ACGAACCGGC GTCGGCCATG A
 
Protein sequence
MTAALPQSPS ARPRPGPPEP VNRRHHHPLR VVHPTAPVDL AAAERAAAAF LAALGVDVAT 
ENRRDTPGRM ARAYAEMFTP RPFDLTTFPN DDGYDEMVLA RAIPVQSVCE HHLLPFVGVA 
HVGYLPGDRI LGLSKLARVV ELFARQPQVQ ERLTQQVADW LQTTLEPRGV GVVIEAEHLC 
MTMRGVHADG VTTVTSAVQG HLRQDAAARA EFFALALPRP TNRRRP