Gene Namu_3642 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_3642 
Symbol 
ID8449261 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp3996682 
End bp3997836 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content71% 
IMG OID645042707 
Producttransaldolase 
Protein accessionYP_003202943 
Protein GI258653787 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0176] Transaldolase 
TIGRFAM ID[TIGR00876] transaldolase, mycobacterial type 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.0794941 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0769479 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGAAC ATTCCGTGAT GACCGATCCA CTGCAGGCCC TGACCGCGGC CGGAGTGTCG 
ATCTGGCTGG ACGACCTGAG TCGGGACCGG CTCACCTCGG GCAGCCTGGC GACCCTGGTC
CGGGACCGGT ACGTCGTCGG GGTCACCACG AACCCCACCA TCTTCACCGC GGCGATCACC
CGCAGCGACG CCTACACCCC CCAGATCCGT GACCTGGCCG TCCGCGGCGT CGACGTCACC
GAGGCACTGC GCGTGCTCAC CGCCACCGAT GTGCGAGCCG CCTGCGACGT CCTGCGGCCG
GTGTTCGACA CCACCGACGG CGTCGACGGG CGGGTCTCGA TCGAGGTCGA CCCCCGGCTC
GCCGACGACA CCGAGGCCAC CATCTCGGCG GCGCAGGCGT TGTGGCGGCT GGTCGGCCGG
CCCAACCTGT ACATCAAGAT CCCGGCCACC AAGCCGAGCA TCCCCGCGAT CGCCGCCTGC
CTGGCCCAGG GGATCAGCGT GAACGTCACC CTGATCTTCT CCCTGACCCG CTACGACGAG
GTTCTGCAGG CGTTCCTCGA CGGCCTGCTG GCCGCGCATC GGGCCGGCCA CGACGTCTCC
AGAATCGGGT CGGTGGCCTC GTTCTTCGTC AGCCGCGTCG ACACCGAGAT CGACCGGCGC
CTGCACCAGA TCGGAACCCG GGAAGCCGCC GCGCTCCGCG GCGCCGCAGG GATCGCGAAC
GCCCGGATCG CCTACGCCCA CTACGAGCGG ATGCTCGCCT CGCCGCAGTG GCTGGCCCTG
GCCGCCCTCG GCGCCCACCC GCAACGTCCG CTGTGGGCCT CGACCTCGGT GAAGGACCCC
GCCTACCCCG ACACCCGCTA CGTCGTCGAT CTTGTCGCAC CCGGCGTGGT GAACACCATG
CCGGAGGGCA CTTTGCAGGC GGTCGCCGAC CACGGCGTGA TTCCCGAGGA TTCGATCCGC
GGCTACTACG CCGGTGCCCA GCGGGTGCTG GTCCGGCTGG CCGCCGTGGG CGTCGACTAC
CGGGACGTCG TGCAAACCCT GGAAGACCAG GCCGTCACGG CGTTCACGGC CAGCTGGGAC
CGGCTGAGTC ACCAGGTGGC CGCCGCCCTG CACGACCCGG TCCCCGCCTT CGGAAGGACC
GTGCCTCATG CCTGA
 
Protein sequence
MTEHSVMTDP LQALTAAGVS IWLDDLSRDR LTSGSLATLV RDRYVVGVTT NPTIFTAAIT 
RSDAYTPQIR DLAVRGVDVT EALRVLTATD VRAACDVLRP VFDTTDGVDG RVSIEVDPRL
ADDTEATISA AQALWRLVGR PNLYIKIPAT KPSIPAIAAC LAQGISVNVT LIFSLTRYDE
VLQAFLDGLL AAHRAGHDVS RIGSVASFFV SRVDTEIDRR LHQIGTREAA ALRGAAGIAN
ARIAYAHYER MLASPQWLAL AALGAHPQRP LWASTSVKDP AYPDTRYVVD LVAPGVVNTM
PEGTLQAVAD HGVIPEDSIR GYYAGAQRVL VRLAAVGVDY RDVVQTLEDQ AVTAFTASWD
RLSHQVAAAL HDPVPAFGRT VPHA