Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_3642 |
Symbol | |
ID | 8449261 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 3996682 |
End bp | 3997836 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 645042707 |
Product | transaldolase |
Protein accession | YP_003202943 |
Protein GI | 258653787 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0176] Transaldolase |
TIGRFAM ID | [TIGR00876] transaldolase, mycobacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.0794941 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0769479 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGAAC ATTCCGTGAT GACCGATCCA CTGCAGGCCC TGACCGCGGC CGGAGTGTCG ATCTGGCTGG ACGACCTGAG TCGGGACCGG CTCACCTCGG GCAGCCTGGC GACCCTGGTC CGGGACCGGT ACGTCGTCGG GGTCACCACG AACCCCACCA TCTTCACCGC GGCGATCACC CGCAGCGACG CCTACACCCC CCAGATCCGT GACCTGGCCG TCCGCGGCGT CGACGTCACC GAGGCACTGC GCGTGCTCAC CGCCACCGAT GTGCGAGCCG CCTGCGACGT CCTGCGGCCG GTGTTCGACA CCACCGACGG CGTCGACGGG CGGGTCTCGA TCGAGGTCGA CCCCCGGCTC GCCGACGACA CCGAGGCCAC CATCTCGGCG GCGCAGGCGT TGTGGCGGCT GGTCGGCCGG CCCAACCTGT ACATCAAGAT CCCGGCCACC AAGCCGAGCA TCCCCGCGAT CGCCGCCTGC CTGGCCCAGG GGATCAGCGT GAACGTCACC CTGATCTTCT CCCTGACCCG CTACGACGAG GTTCTGCAGG CGTTCCTCGA CGGCCTGCTG GCCGCGCATC GGGCCGGCCA CGACGTCTCC AGAATCGGGT CGGTGGCCTC GTTCTTCGTC AGCCGCGTCG ACACCGAGAT CGACCGGCGC CTGCACCAGA TCGGAACCCG GGAAGCCGCC GCGCTCCGCG GCGCCGCAGG GATCGCGAAC GCCCGGATCG CCTACGCCCA CTACGAGCGG ATGCTCGCCT CGCCGCAGTG GCTGGCCCTG GCCGCCCTCG GCGCCCACCC GCAACGTCCG CTGTGGGCCT CGACCTCGGT GAAGGACCCC GCCTACCCCG ACACCCGCTA CGTCGTCGAT CTTGTCGCAC CCGGCGTGGT GAACACCATG CCGGAGGGCA CTTTGCAGGC GGTCGCCGAC CACGGCGTGA TTCCCGAGGA TTCGATCCGC GGCTACTACG CCGGTGCCCA GCGGGTGCTG GTCCGGCTGG CCGCCGTGGG CGTCGACTAC CGGGACGTCG TGCAAACCCT GGAAGACCAG GCCGTCACGG CGTTCACGGC CAGCTGGGAC CGGCTGAGTC ACCAGGTGGC CGCCGCCCTG CACGACCCGG TCCCCGCCTT CGGAAGGACC GTGCCTCATG CCTGA
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Protein sequence | MTEHSVMTDP LQALTAAGVS IWLDDLSRDR LTSGSLATLV RDRYVVGVTT NPTIFTAAIT RSDAYTPQIR DLAVRGVDVT EALRVLTATD VRAACDVLRP VFDTTDGVDG RVSIEVDPRL ADDTEATISA AQALWRLVGR PNLYIKIPAT KPSIPAIAAC LAQGISVNVT LIFSLTRYDE VLQAFLDGLL AAHRAGHDVS RIGSVASFFV SRVDTEIDRR LHQIGTREAA ALRGAAGIAN ARIAYAHYER MLASPQWLAL AALGAHPQRP LWASTSVKDP AYPDTRYVVD LVAPGVVNTM PEGTLQAVAD HGVIPEDSIR GYYAGAQRVL VRLAAVGVDY RDVVQTLEDQ AVTAFTASWD RLSHQVAAAL HDPVPAFGRT VPHA
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