Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_3640 |
Symbol | |
ID | 8449259 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 3993371 |
End bp | 3995341 |
Gene Length | 1971 bp |
Protein Length | 656 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 645042705 |
Product | aconitate hydratase |
Protein accession | YP_003202941 |
Protein GI | 258653785 |
COG category | [C] Energy production and conversion |
COG ID | [COG1048] Aconitase A |
TIGRFAM ID | [TIGR01342] aconitate hydratase, putative, Aquifex type |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.506746 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0138117 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGACGCA ACGTCGCCCA GAAGCTGATC GCCACCCATC TGGTGTCCGG GGAGATGACC CCCGGACGGG AGGTCGGGAT CCGGATCGAC CAGACCCTCA CCCAGGACGC CACCGGCACC ATGGTGATGC TGGAGCTGGA AGCCCTCGGG CTCGACCGGG CCCGCACCGA GGTTTCCGTG CAGTACGTCG ACCACAACCT GCTACAGACC GACAGCAAGA ACGCCGAGGA CCACGCCTTC CTGCGGTCGG CCTGCCAACG GTTCGGGCTG TGGTACTCCA AGGCCGGCAA CGGGGTTTCG CACCCCACCC ACATGCAGCG ATTCGGGATC CCGGGGAAGA CGATGGTCGG CTCGGACAGT CACACCCCGG CCGCCGGCTC GCTGGGCATG CTGGCGATCG GGCTCGGCGG CATCGAGGTG GCCACGGCCA TCGCCGGTGA ACCGGTCTAC CTGCGGATGC CGCAGATCTG GGGTGTCCGG CTGACCGGTG CGCTGCCGGC CTGGGTGAGC GCGAAGGACG TCATCCTGGA GATGCTCCGC CGACACGGCG TCAAGGGCGG CGTGAACCGG ATCATCGAGT ATCACGGTCC GGGGCTGGCC CGGCTGACCG CGATGGACCG ACATGTCATC GCGAACATGG GCGCGGAACT CGGCGCCACC ACCACGGTGT TCCCGGCGGA CGACCAGGTC CGGACGTTCC TGCGGGCGGA GCGGCGGGAG GACGACTTCG TCGAGCTGGT CGCCGACGAC GACGCCACGT ATGACATCGC CGAGACCATC GATCTTTCCA CCCTGGAACC GTTGATCGCA CTGCCCAGTT CACCGGGCAA CGTGCACCCC GTGCACGAGG TGGCCGGCCG GGATGTGCAG CAGGTCGTGG TCGGGTCGTC GGCCAACCCG GGGCTGCGCG ACTTCGCCGT CGTCGCCGCA ATCGTGCGCG GCCGGCAGAC CCACCCCGGG GTGTCCTTCG ATATCAACCC GACCTCCCGG CAGATCCTGC AGGATCTCAC GAAGATGGGC GGCACCCTCG ACCTGATCGC GGCGGGGGCC AGGCTGCACC AATCCGGCTG CATGGGCTGC ATCGGGATGG GTCAGGCCCC CGCGGTCGGC GGTAACAGCC TGCGGACCTT CCCCCGCAAC TTTCCGGGGC GATCCGGAAC CACCGACGAC TCCGTCTATC TGTGTTCCCC GGAAACCGCG GCGGCGGCCG CGCTGACCGG CCGGATCACC GATCCCCGTG ACTTGCCGGG GTTGCTCGGA ATCGACTACC CGCGGATCGA GCTGCCGAGC CGGTCCAGCG TGAACACCGC CATGCTCGAA CCACCTCTGC CGGCCCCGCG GGCCGGTCAG ATCGTGCTGG TGAAAGGGCC GAACATCTCC TCGCTACCCG ATTTCGGTCC GTTGCCGAGT CGGATCGAGG CGCCGGTCGC GCTCAAGGTC GGCGATGACG TGTCCACCGA CGAAATCCTG CCGGCCGGCG CCCGGGTGCT GCCGTATCGC AGCAACATCC CCAGGCTGGC CGAATTCACC TTCGGGCAGC TCGATGACAG CTACTCGCAC CGGGTGCTGG CCGGCCGGGA CGGCAGCGGA CACCTTGTGG TCGCCGGCGC GAACTACGGG CAGGGCTCGT CCCGGGAACA CGCGGTGATC GCCCCCCGCT ATCTCGGTCT GCGGGCCGTC CTGGCGGTGT CGTTCGCTCG AATTCATTGG CAGAACCTGG CGAATTTCGG GGTCCTGGCC CTGGAGTTCA CCGACCCGGA CGACTACCGG AGCATCGAGC AGGGCGACGT GCTGATCCTG GAGGATCTGC GGACCACGCT GCGCAGGGGC TCCGCGGTCG TCCAGATCCA CAATGCCACC CGCGGACGGG ACTACATCAC CAGTCATCGG CTGTCGGGTC GGCAGGTCGG CATGGTCCTG GCCGGTGGGC TCCTGCCCGC GATACGACAG CGTCCGGAAG GGTCGAACTA G
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Protein sequence | MGRNVAQKLI ATHLVSGEMT PGREVGIRID QTLTQDATGT MVMLELEALG LDRARTEVSV QYVDHNLLQT DSKNAEDHAF LRSACQRFGL WYSKAGNGVS HPTHMQRFGI PGKTMVGSDS HTPAAGSLGM LAIGLGGIEV ATAIAGEPVY LRMPQIWGVR LTGALPAWVS AKDVILEMLR RHGVKGGVNR IIEYHGPGLA RLTAMDRHVI ANMGAELGAT TTVFPADDQV RTFLRAERRE DDFVELVADD DATYDIAETI DLSTLEPLIA LPSSPGNVHP VHEVAGRDVQ QVVVGSSANP GLRDFAVVAA IVRGRQTHPG VSFDINPTSR QILQDLTKMG GTLDLIAAGA RLHQSGCMGC IGMGQAPAVG GNSLRTFPRN FPGRSGTTDD SVYLCSPETA AAAALTGRIT DPRDLPGLLG IDYPRIELPS RSSVNTAMLE PPLPAPRAGQ IVLVKGPNIS SLPDFGPLPS RIEAPVALKV GDDVSTDEIL PAGARVLPYR SNIPRLAEFT FGQLDDSYSH RVLAGRDGSG HLVVAGANYG QGSSREHAVI APRYLGLRAV LAVSFARIHW QNLANFGVLA LEFTDPDDYR SIEQGDVLIL EDLRTTLRRG SAVVQIHNAT RGRDYITSHR LSGRQVGMVL AGGLLPAIRQ RPEGSN
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