| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_3615 |
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| Symbol | |
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| ID | 8449234 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | + |
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| Start bp | 3969875 |
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| End bp | 3971791 |
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| Gene Length | 1917 bp |
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| Protein Length | 638 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 645042683 |
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| Product | integrase family protein |
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| Protein accession | YP_003202919 |
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| Protein GI | 258653763 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.00140934 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0339314 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTCGC CGTCGATCGC TGCGCTCACT GTTGAACCAC CCGGAACCGG ACGGTGGCGG
ATTCATGCCC GGATCGAGGA CTACCGGTCC TGGGTGCGCG AGTACATCCC GCACGAGGCC
GTCCGGTGGG AGCGGATACG CGCCTACCGG CGATTCACCG AGACCTGGCC CGACCTGGAG
GAATGGTTCA CCGCACCGCT ACCGGTCCGA CTGGGATTCA CCGGCGGGGA GCTCCGGCCG
ACGGGTCGCA CCGAGATGCA CCGGGCGAAC GGCTACCTGA TCTACCTGTC GCTCGTCGGT
GGCGTGGGAT TGGATTTCGA CCTCCTGTTG GGCCGCAAGT ACACCCGCCC CTTCAGCGTT
CCCGGCGGCG GGAACGGCCT GGGCGTCGAC CTGGCCATGT TCGACCGCTG GGTGGCCAGG
ATGGTCGAGC TCGGATACCC GCAAGCGGGG GCCCGCGGAT ACCTGATGTG GGCGCTCGGC
CGGCTGGTCC TGCACCGGGG AGACCCGGAC CTGACCGCGA TCACCGCAGA TGACCTGTTC
GCGTTGGGGA ACGCGGTCCG CGACTTCGGC GCCCGACCGG ACTACCAGCA ATTGCGCCGC
GCCCTGTTCA CGGTTAGCGG AGCAGCGGAC ACCGGTCACA CCGGTGACCA GTTCATCCGC
ACGCACCTGG CGAAGCTGCA CGCCGCCCAC GTGCTGCTGT TCAACGAGGG CCAGGTGGGC
CAGGCCCCGC AGGTCGGCAC CCGTCAGCGG ATCGGCTGGG CGGACCGGCT GCTCCCGGAA
CCATGCCCGC CGGCGATCCG CGCCGTCGTC GAGCGCTATC TACGGCTGCG GTTGGAAGCC
AAGTTCGACC GGCCCCAGAC CGTCCGGTTG ACCCGAGAAG GGCTCCGCCG CCTGGTCAAC
TGGCTCGCCA AGGTGCACCC GGAGATCACC AACCTGCGCC AGCTGGATCG GTCGCTGATC
GAGGACTACC TGCAATGGTT GCCGGGCTGC CTCAGTCAAC AGACCGGGCA ACCGCTCACT
CCGAGCACCG TCGCGTCGGC GATCAGTGCG GTCGGGGCGT TCTGCCGGGA CACCGCGGTC
TGGGGCTGGA CCGACGTCCC CGGCCGACCG CTGGTCACGA CCCGAGACAC TCCGAAACAA
CCCAAACCAC TACCCAGGTT CCTCCCTGCG GACGAACTGG CGGCGATCAT GACCGCCATC
GATGCCCTGG CCGATCCCGC GCAGCGCGCC GCCCTGCTGT TGCTGCGGTG GTCAGGGGCC
CGGCGTGACG AGATCCGCCG GCTCACCTGG GACTGCCTGG ACCACGACCT CCACGGCAAC
CCGCGGCTGC GGATCCCGGT CGGCAAGTCC TACACGGAAA GGATCGTCCC ACTGCATCCG
GACGCCGCAG CGGCGTTGCG CGGCGCGATC ACCGCGGCGA AAGCACAGAA CGCGATCGCC
CGGCACGATC AGCACGCCAG CCGCGCGGTC AACTACGTGT TCATGCGCCA CGGGAAGCTC
CTGTCCAAGA CAACCCTGTT CGACGACGCG TTCCGCACGG TGTGTGGCGC CGCCGGTCTG
CTCGACGCGC ACGGCGTCCC CAAGGTCAGC GCGCACCGGT TCCGGCACAC CCTGGGCACC
CAGCTCGCCG AGGGCGGCGC CCGGATCCAA ACGATCATGG CAATCCTCGG GCACCGCAGC
GCTGAGATGT CCCTCGTGTA TTCGCGGATC TCTGACCCGG AGATTCGCCG GCAATACGAA
ACCGCGCTCG CCGGCGGCGG CCGGATAGCC GGCCCTGCGG CCGACGCGCT GCTCCACGAC
AAGCTCGACT ACCAGGCAGT TCACTGGTTG CAGACCAACT TCCTCAAGAC CGAACTCGAA
CTGGGGCACT GTCTCGGCTG CCCGCCGAAG GGCCCTGCGA ATGCGATCTC GTGCTGA
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| Protein sequence | MSSPSIAALT VEPPGTGRWR IHARIEDYRS WVREYIPHEA VRWERIRAYR RFTETWPDLE
EWFTAPLPVR LGFTGGELRP TGRTEMHRAN GYLIYLSLVG GVGLDFDLLL GRKYTRPFSV
PGGGNGLGVD LAMFDRWVAR MVELGYPQAG ARGYLMWALG RLVLHRGDPD LTAITADDLF
ALGNAVRDFG ARPDYQQLRR ALFTVSGAAD TGHTGDQFIR THLAKLHAAH VLLFNEGQVG
QAPQVGTRQR IGWADRLLPE PCPPAIRAVV ERYLRLRLEA KFDRPQTVRL TREGLRRLVN
WLAKVHPEIT NLRQLDRSLI EDYLQWLPGC LSQQTGQPLT PSTVASAISA VGAFCRDTAV
WGWTDVPGRP LVTTRDTPKQ PKPLPRFLPA DELAAIMTAI DALADPAQRA ALLLLRWSGA
RRDEIRRLTW DCLDHDLHGN PRLRIPVGKS YTERIVPLHP DAAAALRGAI TAAKAQNAIA
RHDQHASRAV NYVFMRHGKL LSKTTLFDDA FRTVCGAAGL LDAHGVPKVS AHRFRHTLGT
QLAEGGARIQ TIMAILGHRS AEMSLVYSRI SDPEIRRQYE TALAGGGRIA GPAADALLHD
KLDYQAVHWL QTNFLKTELE LGHCLGCPPK GPANAISC
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