Gene Namu_3608 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_3608 
Symbol 
ID8449227 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp3960372 
End bp3961277 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content68% 
IMG OID645042678 
ProductIntegrase catalytic region 
Protein accessionYP_003202914 
Protein GI258653758 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.0251528 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0493713 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
CTGCGGTGGG GAGTCGAGCC GATCTGCAAG GTCCTGTCCG AGCACCTGGG TCTGCGGATC 
GCCCCGTCCA CCTACTACGA GCACGCCGCC CGGCCCGCCC AGACGCGGCC GGCCGCGGTG
CGGGATGCGG CCCTGCTCGA GCAGATCCGC CGGGTCCACA CAGAGAACAA CCACGGCACC
TATGGTGCCC GGAAGGTGTG GCTGCAGCTG AACCGGGAAG GCGTCTCGGT GGCCCGGTGC
ACCGTGGAAC GGCTGATGCG CTCCGCCGGC CTGGTCGGTG TCCGCCGGGG CAAGATCAAG
CGGACGACGG TCGCCGATCC GGGTGCGCAG CGGCCCGCTG ACCTGGTGCA ACGACGGTTC
GGCGCGCTCG TGCCGGATCG TTTGTGGGTG GCCGACATCA CCTACGTGAG TACCTGGTCG
GGATGGGTGT ACGTGGCGTT GGTGACCGAT GCCTACGCCC GCCGCATCCT GGGCTGGCGG
GTCGCGACCA CGATGACCAC ACAGCTCGTC CTGGACGCGT TGGAGCAGGC CATCTGGACC
CGTCAACGGG CCGACCGGAC TGTGGAACAC GTCGTGGCGC ACAGCGACCG CGGGTCCCAG
TACACATCCA TCCGGTACTC CGAACGCCTC GCCGAGGTCG GCATCGCAGC ATCGGTCGGC
AGCGTCGGCG ACTCCTACGA CAACGCCCTG GCCGAAACAA TCAACGGCCT GTACAAGGCC
GAAGTGATCC GTCACCGCGG CCCCTGGCGC AGCATCGACT CCGTCGAATT CGCCACCGCC
GAATGGATCG ACTGGTACAA CCACCGACGC CTGCACGAGT ACTGCGGCGA CATCCCACCA
GCCGAACTCG AGGACGCGTT CTACGCTCAC CACCGAGCCC AGCAAACCGC CGGACTCACC
GTTTGA
 
Protein sequence
MRWGVEPICK VLSEHLGLRI APSTYYEHAA RPAQTRPAAV RDAALLEQIR RVHTENNHGT 
YGARKVWLQL NREGVSVARC TVERLMRSAG LVGVRRGKIK RTTVADPGAQ RPADLVQRRF
GALVPDRLWV ADITYVSTWS GWVYVALVTD AYARRILGWR VATTMTTQLV LDALEQAIWT
RQRADRTVEH VVAHSDRGSQ YTSIRYSERL AEVGIAASVG SVGDSYDNAL AETINGLYKA
EVIRHRGPWR SIDSVEFATA EWIDWYNHRR LHEYCGDIPP AELEDAFYAH HRAQQTAGLT
V