Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_3579 |
Symbol | |
ID | 8449198 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 3930560 |
End bp | 3932224 |
Gene Length | 1665 bp |
Protein Length | 554 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 645042653 |
Product | Integrase catalytic region |
Protein accession | YP_003202889 |
Protein GI | 258653733 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.318948 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0294247 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCGACG AGGCGGTGGT CCAGGAGCGG GCGCTGTCGG TTCCGGACGA GGTTTGGAAT CTGGCGGTTC GTCGGGCAGC TGTGATCGGC CCGCTGGCTG AGCGGGATGT CGTGGGTCGG GCGTCGGTGG AGGCAGCCGC GGCGGAGCTG CGGGTGTCCG TTCGTCAGGT CTACGTGCTG CTTCGCCGCT GGCGGCAGGG CGAGGGGGTG GTGTCGGATC TGATTCCGGG CTGGTCCAGC GGCGGTCGTG GTCGCGACCA GCTCCCGGAG GAGGTCGAGG TGGTTATCCG GGAGGTGCTG CGCCGGCAAT ACCTGACTCG GCAGCGGAAG ACGGTCGCGA CGGTGCACCG GGAGATCGTC CGGCAATGCC GCACCCAGGG ACTGCGGCCG CCGTCGCGGG GTTCGGTGGT GCGGCGGATC GCGAAGCTCG ACCCGGCGCA GGCCACGCGT CGGCGGGAGG GATCCGACGC GGCGCGGGCC CGGGCGTCGG CCGGCGGGGT GCCTCCGTCG GTCACCGCGG TGCTGGAACA GATCCAGATC GACCATACGG TGGTCGACCT GATCGTGGTC GACGAGCGGC ACCGGCTGCC GATCGGCCGC CCGTATCTGA CGGCCGGGAT CGACGTGTTC AGCCGGGCGG TCCCCGGATT GGTGGTCACG TTGGAGGCGC CGTCGGCGAC CACGGTCGGG TTGTGCCTGG CGCACATGGT CACCGACAAG CGGCCCTGGC TGGAGCACCT CGGGGTGGAG GCGTCCTGGC CGATGAGCGG CAAACCGGTC GAGCTGTACC TGGACAACGC CGCGGAATTC AGGAGCGAGG CGTTGCGTCG CGGATGTGAG CAGCACGGGA TCGCGCTGCG GTACCGGCCA CCCGGGCGGC CGCACTACGG CGGCATCGTC GAGCGGGTGA TCGGCACGAT GATGCGGCTG ATCCACGAGC TGCCCGGGAC GACGTTCTCC AATCCCGGGC AGCGATCGGG GTACGACGCC GACGCGACGG CCTGCCTGAC GATGACGGAG CTGCAGCGGT GGCTGGCCCT GGCGGTGGCC GCCTATCACG GACAGGTCCA CGGCACCCTG CGCCAGCCAC CCGCGGCCCG ATGGGTCGAC GGGATCGCCA CCACCGGCGC GCCGGCGGTC GTCACCCACG AGGCGGCGTT CCTGGTCGAC TTCCTGCCGG TGATCCGCCG GACCCTGACC AGAACCGGGT TCGTGATCGA CCACGTGCAC TACTTCTGCG ACGCGCTCAA GCCCTGGATC GCCCGCCGGG ATCGACTGGG CCGGTTCGTG ATCCGACGGG ACCCGAGAGA CATCAGCCGG GTCTGGGTCC TGGACCCGGA CGACGGGACC TACCTCGAGG TGCCGTACCG GACCATGTCC CATCCGGCGG TGAGCGTGTG GGAACACCGG GCGGCGGTGG AACGACTCCG CACCCTTGGC CGTGACCAGG TCGACGAGGA CGCCCTGTTC CGGACGGTGG AGCAGATGCG GTCCATCACC GAGTCAGCCG CGGCGACTAC CCGCAAGGCC CGCCGCGACA CCGCCCGTCG AGCAGCCAGC GGCGGCACGA GCGCCCAGCG GCCCAGCAGC ACTACGCCGG AATGTCCACC CGACGACGCC GTGGCGACGC CGGCGGCCCC ATTCGACGTG ATCGAGCAAT GGTGA
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Protein sequence | MVDEAVVQER ALSVPDEVWN LAVRRAAVIG PLAERDVVGR ASVEAAAAEL RVSVRQVYVL LRRWRQGEGV VSDLIPGWSS GGRGRDQLPE EVEVVIREVL RRQYLTRQRK TVATVHREIV RQCRTQGLRP PSRGSVVRRI AKLDPAQATR RREGSDAARA RASAGGVPPS VTAVLEQIQI DHTVVDLIVV DERHRLPIGR PYLTAGIDVF SRAVPGLVVT LEAPSATTVG LCLAHMVTDK RPWLEHLGVE ASWPMSGKPV ELYLDNAAEF RSEALRRGCE QHGIALRYRP PGRPHYGGIV ERVIGTMMRL IHELPGTTFS NPGQRSGYDA DATACLTMTE LQRWLALAVA AYHGQVHGTL RQPPAARWVD GIATTGAPAV VTHEAAFLVD FLPVIRRTLT RTGFVIDHVH YFCDALKPWI ARRDRLGRFV IRRDPRDISR VWVLDPDDGT YLEVPYRTMS HPAVSVWEHR AAVERLRTLG RDQVDEDALF RTVEQMRSIT ESAAATTRKA RRDTARRAAS GGTSAQRPSS TTPECPPDDA VATPAAPFDV IEQW
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