| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_3562 |
|---|
| Symbol | |
|---|
| ID | 8449181 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | - |
|---|
| Start bp | 3913644 |
|---|
| End bp | 3915149 |
|---|
| Gene Length | 1506 bp |
|---|
| Protein Length | 501 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 645042637 |
|---|
| Product | iron-sulfur cluster binding protein |
|---|
| Protein accession | YP_003202873 |
|---|
| Protein GI | 258653717 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1139] Uncharacterized conserved protein containing a ferredoxin-like domain |
|---|
| TIGRFAM ID | [TIGR00273] iron-sulfur cluster-binding protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.0176735 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.00702325 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACCT TCCTGGGCAT CCCGAGAAAG CACGCGGCGC AGGAGGAATC ACCGCTGCGC
GGCACCCTGC CGTTCCCGAA GGCGGCCCGC AAGGAACTCG CCAACGGTCA GCTGCGGCGC
AACCTGGCCC ACGCCACCTC GGTGATCCGG ACCAAGCGGG CGCAGGTCGT GGACGAGATG
CCCGACTGGG AAGCGCTGCG CGATGCCGGC GCGGCGACCA AGACCCAGGT GATGTCGAAC
CTGCCCGCGC TGCTGGAACA GTTCGAGGCC AACGTCATCG CCCGCGGCGG CGTCGTGCAC
TGGGCCACCG ACGCCCAGGA GGCCAACCGG ATCGTCACCG ACCTGGTCCG CGCGCAGGGC
GTCGACGAGG TCATCAAGGT CAAATCGATG GCCACCCAGG AAATCGGCCT CAACGAGTAC
CTCGAGGACA ACGGCATCGC CGCGGTCGAG ACCGACCTGG CCGAACTGAT CGTCCAACTC
GGCCACGACA AGCCCTCCCA CATCCTGGTC CCGGCCATCC ACCGCAACCG CACCGAGGTC
CGCGACATCT TCCTCGCCGA GATGGCAGAC GCACCCGCCG ATCTGACCGA CGAGCCGCGC
CGCCTGGCGA TGGCCGCCCG GGAACACCTG CGCCGTAAGT TCCTGCGCAG CAAGGTTGCG
ATCTCCGGCA CGAACTTCGG CATTGCCGAG ACCGGCACCA TCGGCGTCGT GGAGTCCGAG
GGCAACGGCC GGATGTGCGT GACCCTGCCC GACACGTTGA TCACCGTGAT GGGCATCGAA
AAGATCCTGC CCACGTTCAC CGACCTGGAA GTGTTCCTGC AACTGCTGCC CCGCTCCTCG
ACCGGGGAAC GGATGAACCC GTACACCTCG CTGTGGACCG GCGTCACCCC CGGCGACGGC
CCACAGAACT TCCATCTCAT CCTGCTCGAC AACGGCCGCA CCAACGCCCT GGCCGACCAG
GTCGGCCGGG CCGCGCTGCA CTGCATCCGC TGCTCGGCCT GCCTGAATGT CTGCCCGGTC
TACGAACGCA CCGGCGGCCA CGCCTACGGC TCGGTCTACC CGGGTCCGAT CGGCGCCGTC
CTGACCCCGC AGCTGACCGG AATGCACGGT CATGGTGACG TCAACTCGAC CCTGCCCTAC
GCCTCATCCC TCTGCGGCGC CTGCTACGAC GTGTGCCCGG TCAAGATCCC CATCCCCGAC
CTGCTGGTCG AACTGCGCGG CCGCGCCGTC GATGCCGATC GCGGTCGCAC CATTCCCGGC
GGGTGGGACG CCGCGATGAA GGCCGCATCC TGGATCATGA GCAACCCCAC CCGGTTCGCC
GCCGTCGAAA AGGGCCTGGC CGCCGGCCGT CTCGTCGCGG GGAAGGATCA GAAGATCAAA
CACCTGCCGT TCCCCGGGTC CGCCTGGACT CACAGCAAGG ACATGCCCGC ACCCCCGAAG
CAGACGTTCC GGCAATGGTG GAAACAAACC CATCCGGACA CCGATCAGCC GGGGGGCCCG
GCATGA
|
|---|
| Protein sequence | MSTFLGIPRK HAAQEESPLR GTLPFPKAAR KELANGQLRR NLAHATSVIR TKRAQVVDEM
PDWEALRDAG AATKTQVMSN LPALLEQFEA NVIARGGVVH WATDAQEANR IVTDLVRAQG
VDEVIKVKSM ATQEIGLNEY LEDNGIAAVE TDLAELIVQL GHDKPSHILV PAIHRNRTEV
RDIFLAEMAD APADLTDEPR RLAMAAREHL RRKFLRSKVA ISGTNFGIAE TGTIGVVESE
GNGRMCVTLP DTLITVMGIE KILPTFTDLE VFLQLLPRSS TGERMNPYTS LWTGVTPGDG
PQNFHLILLD NGRTNALADQ VGRAALHCIR CSACLNVCPV YERTGGHAYG SVYPGPIGAV
LTPQLTGMHG HGDVNSTLPY ASSLCGACYD VCPVKIPIPD LLVELRGRAV DADRGRTIPG
GWDAAMKAAS WIMSNPTRFA AVEKGLAAGR LVAGKDQKIK HLPFPGSAWT HSKDMPAPPK
QTFRQWWKQT HPDTDQPGGP A
|
|---|
| |