| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_3551 |
|---|
| Symbol | |
|---|
| ID | 8449170 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | - |
|---|
| Start bp | 3901015 |
|---|
| End bp | 3901620 |
|---|
| Gene Length | 606 bp |
|---|
| Protein Length | 201 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 645042628 |
|---|
| Product | YbaK/prolyl-tRNA synthetase associated region |
|---|
| Protein accession | YP_003202864 |
|---|
| Protein GI | 258653708 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2606] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.0146665 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.0164615 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCGGCCG CGACGCTACG CCGGCCGCGT CGTAAGGTGC CCGGCGGCGA GGGAATCGGC
CGCGAGGGAA TCGGCCGCGA GGGAATCGGC CGCGACGGAT TCGGCGGCGA GGGCAGCGAT
CGAACGGAGC AGGCAATGCA TCCCAACGTG CAGCTGGTGG CCCAGGCGCT GGCGGCCGCC
GGGGCCGGCG GGCAGGTCCG CGAGCTGGCC GATGCCGTGC GCACCGCGCA GGACGCCGCG
GCCGCCCTGG GTTGCTCCCC GGCGGCCATC GCCAACAGCT TGATCTTCAT GGCCGACGAG
CAGCCCGTGT TGATCCTGAC CAGCGGCGGG CACAAGGTCG ACACCGCGCA CGTGGCCGGG
TTGCTGGGCG TCGACCGGCT GCGCCGGGCC ACTCCGGACC AGGTGCGGGC GGCCACCGGC
CAACCGATCG GCGGGGTCGC CCCGGTGGGC CACCCGGCGC CCGTGCGCAC CCTGGTCGAC
GTGGCCCTGC AACCCTTCCC GGTGATCTGG GCGGCCGGCG GCACGCCGCA CACCGTTTTC
CCGACCACCT ACGCCGAACT GCTCACCATC ACCGGTGGCA CGCCGGTCGC CGTGGTGGCC
GACTGA
|
|---|
| Protein sequence | MPAATLRRPR RKVPGGEGIG REGIGREGIG RDGFGGEGSD RTEQAMHPNV QLVAQALAAA
GAGGQVRELA DAVRTAQDAA AALGCSPAAI ANSLIFMADE QPVLILTSGG HKVDTAHVAG
LLGVDRLRRA TPDQVRAATG QPIGGVAPVG HPAPVRTLVD VALQPFPVIW AAGGTPHTVF
PTTYAELLTI TGGTPVAVVA D
|
|---|
| |